Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1245 |
Symbol | |
ID | 5709397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1314976 |
End bp | 1315701 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641275750 |
Product | cytidyltransferase-like protein |
Protein accession | YP_001541062 |
Protein GI | 159041810 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis [S] Function unknown |
COG ID | [COG0615] Cytidylyltransferase [COG1849] Uncharacterized protein conserved in archaea |
TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0187562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.00542026 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTACCT TAGCTGATAG GGTATTGACT TATGTTAGAA ACGTTGAGCA GGCTATTGAG GCATTACGCA CTAATGCTAA TGGTGGTGGG GAGGTTGGTG AATTAATTGA GTTGGCTGAG GCTTATCTTA AGGATACTTT ACACTACTTC AAGGTGGGTG ACTATGAGAC GGCTCTGGCT ACGATATCCT ACGCAGAGGG CTTGCTGGAT GCCTTAAGGA TCCTTAAGTT GAGTGAGGTT AATTGGAGGA AGCCGAGTGA ATTAGCTAAG TTAGCGTCAA GGAAGGTTTT CGTGGCTGGC ACATTCGATA TAATACACCC AGGCCACGTG GGGTACCTTA AGTACGCCTG GGGTTTAGGC AGGGTTGTGG CTGTTGTCTC CACTGATGAG AGTGTTAAGA GGATTAAGGG TAGGGAGCCT ATAATACCCG CTAAGCAGAG GGTTGAGGTG CTTGAGGCCA TAGAGTACGT TACTAAGGCT AGGGTTGGTT ATGAGGATGA CATGTTTAGG GTTGTTGAGG AGGAGAAGCC TGATATAATA CTCCTCGGGC CTAATCAACC CTTCACCGAG GAGGAGATTA GGAGAGCCTT AAGGAGTAGG GGTATTAACG CTGAGGTGGT TAGGATGCCT AATATTATTA ACTGCCAGTT ATGCAGCACC AGTAGCATAG TTAGGAGGAT TCTGGAGATG GCCGGGGAAT TAACCTCATC CCTCAGGAAT CATTAA
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Protein sequence | MSTLADRVLT YVRNVEQAIE ALRTNANGGG EVGELIELAE AYLKDTLHYF KVGDYETALA TISYAEGLLD ALRILKLSEV NWRKPSELAK LASRKVFVAG TFDIIHPGHV GYLKYAWGLG RVVAVVSTDE SVKRIKGREP IIPAKQRVEV LEAIEYVTKA RVGYEDDMFR VVEEEKPDII LLGPNQPFTE EEIRRALRSR GINAEVVRMP NIINCQLCST SSIVRRILEM AGELTSSLRN H
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