Gene Cmaq_1197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1197 
SymbolileS 
ID5708781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1259417 
End bp1262392 
Gene Length2976 bp 
Protein Length991 aa 
Translation table11 
GC content46% 
IMG OID641275700 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_001541014 
Protein GI159041762 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.65985e-06 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value3.78196e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCTGCTA TTGATTTTAA ACTAGGTTCA AGGTATGATC CATTGAAGGT TGAGGAGGTG 
GTGTTGAAGT TCTGGGATGA AGCTAAGATA CCTGAGAAGT GGAGGAGTTT TAAGGGGGAG
GGGTTATTCA CTTTCCTTGA GGGTCCGCCG ACAACTAATG GTTTCCCTCA TGTTGGTCAT
GTTAGGGGTA GGACGTATAA GGATATTGTG TTAAGGTATA TGAGGCTTAA AGGTTACTCG
CTTTGGGTTC AGGGTGGTTG GGATGAGCAG GGGTTACCTG TTGAGATTGA GGTTGAGAGG
AGGCTTGGGG TTAAGACTAA GAAGGATATT TTCGATAAGA TAGGGGCTGA GCGATTCTCG
GAGGAGTGTA ATTCACTTGT GGATTATTAC CTTAAGTACT GGGTTGAGGA TGGTACGAAG
AGGCTTGGGC TTTGGCTTGA TGTTGAACAC GCCTATGAGA CTAGGAGGCC GTACTACATT
GAGCATGTTT GGGCATTCAT AAAGAACATG CATGAAAAGG GTTTACTCAC TGAGGATTAC
AGGGTATTAC CATTCTGTCC AAGGTGTGAG ACGGCGCTTA GTGATGCTGA GGTTGATCAG
GGTTATGAGG ATAGGGAGGA TCCATCAATA TTCGTGAAAT TCCCAGTGGA TGGTAGTGAG
GGTGTGTATT TGGTTATTTG GACAACAACC CCCTGGACAC TGATTGATAA TGAGGCCGTT
GCCGTTAATC CTGATGCAGA TTACGTACTT GTGAGGGTTA AGGGGAGTAA TGGTACTGAG
TATTGGTGGC TTGCCGAGAG GCTTATGCAG AGTGTTCTTA ATGCAGCTAA TGTTAAGGAG
TTTGAGATAG TTAAGAGGGT TAAGGGGAGT GAACTTGAGG GGATTAGGTA CATTCACGTC
TTCCTAAATG AAGTGCCCAT TCATAAGACC CACTCAAATG CGCACTACGT TATTGCTGAA
CCCTTCGTAA CCCTTGAGGA GGGAAGCGGC CTAGTCCACA TAGCCCCAGC CCACGGTCCA
GAGGACTTTG AGGCGGGTAG GCGTAGGAAC CTACCTATTA CTAATAGTGT TGAGATAAAT
GGGGTATTCA ATAGTAATGG CGGGGTCTTC AACGGTATGT ATTGGCTTGA TGTTAATAGG
AGGGTTATTG AGGAGCTTAG GCATAGGGGC CTACTGGCTC ATCAAGGTAC AGTGATGCAC
AGGTATCCGC ACTGCTGGAG GTGTGGGACG CCTTTAATAT ATAGGACTGA TAGGCAGTGG
TTCATAAGGA TATCAAGCCT CAGGGGCAGT TTAGTTAATG AATTATCTAA GGTTAGGATT
ATTCCACAAA GCTTAAGGAA CAGGTTCGAT GACTGGGTAG CCAATATTAG GGATTGGGTA
ATATCAAGGA GTAGGATTTG GGGTACGCCA CTACCAATAT GGAGGTGTAG GGATGATCCA
AGTAAGGTAA TGGTAATCGG ATCAATAGAG GAGTTGAGGA AGCTTGCCGT TGAACTACCC
AATGTACCTG ATGAGAAGCT TATCCACAGA CCCTGGATAG ATATGGTTAA GTTAAGGACC
CCCGACTGCA GTGAGTGGGT TAGGGAACCC TTCGTTGGTG ACGTTTGGTT AGATAGTGGT
GTAGCCTGGA TAGCCGGTGT TGATGGATTG AGGAATAGGG AGCTTTGGAG TAAACTATAC
CCCTACGACT GGGTCACTGA GGCTGTGGAT CAAACCAGGG GCTGGTTCTA CAGTCTACTA
GCCACCTCAG TGGCCTGGAT GGGTAAGGCA CCCTACAAAA CCATATTGAT AACTGGGCAC
GTGGTGGATA AGTATGGGCA GAAGATGAGT AAGTCGAAGG GTAACGTGAT TTGGGCAAGG
GACCTCATGA GTAGGTATGG GGCTGACGTC ACTAGGCTTT ACCTAGCCTC TAAGGCAGCC
CCATGGGAGA CCCTGCCGGT TAACCCAGAT GAGTTTTCAG GTATTAGGAA TATTCTAACT
GTTCTATGGA ATAGCGTTAG GTTCGCTGAC ATGTACATGA GGCTTGATAA CTATGACCCA
AGGGGGCATA GTATTAATGA GGTTTTACCT AAGGCTAAGA GCGAGGATAA GTGGATGCTC
TCAAGGTACT TCAGTAGGTT AAGTAGGATA ACCCAGTACC TTGATGAATT CAGGATTCAT
GAGGCTGCAA GGGAGTGGAT AAGCCTGATT GTTGATGATG TGAGCCACGG TTACATTAGG
CTAATTAGGC GTAGGGTATG GGTTGAGGGG AGTGATGACG ATAAGCTAGT AGTCTACACC
GTGCTTTACA ACGTGCTTAA GGGTGCAATA GTGATTGGGT CGGTTTTCAC ACCATTCATA
ACCGAGTACT TGTACAAGGC CTTCGTTAGG GATGCAGCCG ATAGCGTTCA CTTAGCCCCA
ATGCCGGAGA TTAGGCGTGA CTTAATTAAT GAGAGGCTTG AGAAGGCCTA CGACGCAATC
TTCGAAGCCT TCTCACTAAC AGCCGCTATT AGGAATAATT TAGGCATTAA GCTTAGGTGG
CCGTTGAGTG ACATGCAGGT TAAGGTTAAG AATAGTGAAA TCACTGAAAC AGTGCGTGAA
TTACTGGATC AATTATCATT CCTATCCAAT GTTAAGCAGG TTAGGCTTAC TAATGAGCTT
CAATGCGGTA ATGACTACGT TAAGGCGGAG GGGGTGTTGG TTGATGTGTG TTTAAACAAG
GTTATTAACG AGGACCTGTA TCATGAGGCA ATGGCTAGGG AATTAATTAG GAGGATTCAG
GTAATGAGGA GTAAGGCTAA CTTAGACCTG GAGGAGAGGA TTAGAGTATA CATTACTGCT
GATGATGAGG TTAAGAAGAC CGTGGAGAGA ATGAGGAGTA TGATTGAGAA TGAGGTTAGG
GGGACTGTAC TCTTCAGTGA GCCATCTAAA CCAGTCTTAA CAATGGATTG GGATATTGAG
GATAAGAGGG TTAAAATCAG TATAGAACGT TCCTGA
 
Protein sequence
MSAIDFKLGS RYDPLKVEEV VLKFWDEAKI PEKWRSFKGE GLFTFLEGPP TTNGFPHVGH 
VRGRTYKDIV LRYMRLKGYS LWVQGGWDEQ GLPVEIEVER RLGVKTKKDI FDKIGAERFS
EECNSLVDYY LKYWVEDGTK RLGLWLDVEH AYETRRPYYI EHVWAFIKNM HEKGLLTEDY
RVLPFCPRCE TALSDAEVDQ GYEDREDPSI FVKFPVDGSE GVYLVIWTTT PWTLIDNEAV
AVNPDADYVL VRVKGSNGTE YWWLAERLMQ SVLNAANVKE FEIVKRVKGS ELEGIRYIHV
FLNEVPIHKT HSNAHYVIAE PFVTLEEGSG LVHIAPAHGP EDFEAGRRRN LPITNSVEIN
GVFNSNGGVF NGMYWLDVNR RVIEELRHRG LLAHQGTVMH RYPHCWRCGT PLIYRTDRQW
FIRISSLRGS LVNELSKVRI IPQSLRNRFD DWVANIRDWV ISRSRIWGTP LPIWRCRDDP
SKVMVIGSIE ELRKLAVELP NVPDEKLIHR PWIDMVKLRT PDCSEWVREP FVGDVWLDSG
VAWIAGVDGL RNRELWSKLY PYDWVTEAVD QTRGWFYSLL ATSVAWMGKA PYKTILITGH
VVDKYGQKMS KSKGNVIWAR DLMSRYGADV TRLYLASKAA PWETLPVNPD EFSGIRNILT
VLWNSVRFAD MYMRLDNYDP RGHSINEVLP KAKSEDKWML SRYFSRLSRI TQYLDEFRIH
EAAREWISLI VDDVSHGYIR LIRRRVWVEG SDDDKLVVYT VLYNVLKGAI VIGSVFTPFI
TEYLYKAFVR DAADSVHLAP MPEIRRDLIN ERLEKAYDAI FEAFSLTAAI RNNLGIKLRW
PLSDMQVKVK NSEITETVRE LLDQLSFLSN VKQVRLTNEL QCGNDYVKAE GVLVDVCLNK
VINEDLYHEA MARELIRRIQ VMRSKANLDL EERIRVYITA DDEVKKTVER MRSMIENEVR
GTVLFSEPSK PVLTMDWDIE DKRVKISIER S