Gene Cmaq_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1194 
Symbol 
ID5710176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1255087 
End bp1255842 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content47% 
IMG OID641275696 
Producthypothetical protein 
Protein accessionYP_001541011 
Protein GI159041759 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.138599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0000509262 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTATTA GGTTTTACTC CATTACGGGG AGGACGGAAT CCATTGAGAA TGAGGTTAGG 
GCCCTTGTTA ATGACATTAA GGCTGAATTA GCTAAGAGGG GTGTGGGTGA GGATAAGGTT
AGGTTAACTA TTATTAAGGT TAGGGGTGAT GTTATTGATG ATGTTATTAA GTACCTTGAT
CAACCTGAAG GCAAAATACC AGGCCAATAT AAGTCACTTA TAGTTAGGAT GAGGCAGGAT
GGGGTTTCAT CATTCCCAGC CATGGTTATT AACGATAGGA AGGTGGCTGA GGGTAGTGAA
TTAACAATGG ATGCCATTAA GGCTGCATTA GCTAAGGAAC TTAAGGAGGA ATTCAACCTA
GAGATACCTT CAGTAACCTC ACCAATACCC CAGGCTCAAC CAGTATCAAC ACCCCAACCC
CAGCCAATCC AACCCCCACC TCCACCCCCA CCGGAAATTC CACCACCTCA GGCTATTCAA
CCCCAACCAG TTAAACCCAT AACACCTCCA CCGACCCCAC CGCCTCCAGT GACTCTGCAG
ACTCCGCCAA CTCCGCCTCA ACCCACGCAG GTTCAACAGA CGGTAACAAT ACCAGAAACC
CCAGTAACCA CTGGGGAGCT TGGGTTTAAG ATAGTTAACG GTAGGCCTGA TAACTGCAAT
GACTGCGTCT ACTATGGTGC GCATAAGGGT TACTGCTACT TATTCGGCTT TAGGGTTAAT
GACCCATCAA AACCACCCTG TAAATCAATA GCCTAA
 
Protein sequence
MIIRFYSITG RTESIENEVR ALVNDIKAEL AKRGVGEDKV RLTIIKVRGD VIDDVIKYLD 
QPEGKIPGQY KSLIVRMRQD GVSSFPAMVI NDRKVAEGSE LTMDAIKAAL AKELKEEFNL
EIPSVTSPIP QAQPVSTPQP QPIQPPPPPP PEIPPPQAIQ PQPVKPITPP PTPPPPVTLQ
TPPTPPQPTQ VQQTVTIPET PVTTGELGFK IVNGRPDNCN DCVYYGAHKG YCYLFGFRVN
DPSKPPCKSI A