Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1194 |
Symbol | |
ID | 5710176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1255087 |
End bp | 1255842 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641275696 |
Product | hypothetical protein |
Protein accession | YP_001541011 |
Protein GI | 159041759 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.138599 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0000509262 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTATTA GGTTTTACTC CATTACGGGG AGGACGGAAT CCATTGAGAA TGAGGTTAGG GCCCTTGTTA ATGACATTAA GGCTGAATTA GCTAAGAGGG GTGTGGGTGA GGATAAGGTT AGGTTAACTA TTATTAAGGT TAGGGGTGAT GTTATTGATG ATGTTATTAA GTACCTTGAT CAACCTGAAG GCAAAATACC AGGCCAATAT AAGTCACTTA TAGTTAGGAT GAGGCAGGAT GGGGTTTCAT CATTCCCAGC CATGGTTATT AACGATAGGA AGGTGGCTGA GGGTAGTGAA TTAACAATGG ATGCCATTAA GGCTGCATTA GCTAAGGAAC TTAAGGAGGA ATTCAACCTA GAGATACCTT CAGTAACCTC ACCAATACCC CAGGCTCAAC CAGTATCAAC ACCCCAACCC CAGCCAATCC AACCCCCACC TCCACCCCCA CCGGAAATTC CACCACCTCA GGCTATTCAA CCCCAACCAG TTAAACCCAT AACACCTCCA CCGACCCCAC CGCCTCCAGT GACTCTGCAG ACTCCGCCAA CTCCGCCTCA ACCCACGCAG GTTCAACAGA CGGTAACAAT ACCAGAAACC CCAGTAACCA CTGGGGAGCT TGGGTTTAAG ATAGTTAACG GTAGGCCTGA TAACTGCAAT GACTGCGTCT ACTATGGTGC GCATAAGGGT TACTGCTACT TATTCGGCTT TAGGGTTAAT GACCCATCAA AACCACCCTG TAAATCAATA GCCTAA
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Protein sequence | MIIRFYSITG RTESIENEVR ALVNDIKAEL AKRGVGEDKV RLTIIKVRGD VIDDVIKYLD QPEGKIPGQY KSLIVRMRQD GVSSFPAMVI NDRKVAEGSE LTMDAIKAAL AKELKEEFNL EIPSVTSPIP QAQPVSTPQP QPIQPPPPPP PEIPPPQAIQ PQPVKPITPP PTPPPPVTLQ TPPTPPQPTQ VQQTVTIPET PVTTGELGFK IVNGRPDNCN DCVYYGAHKG YCYLFGFRVN DPSKPPCKSI A
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