Gene Cmaq_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1179 
Symbol 
ID5709332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1237422 
End bp1238819 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content46% 
IMG OID641275681 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001540996 
Protein GI159041744 
COG category[C] Energy production and conversion 
COG ID[COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.200683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGCAA TACTCCAAAG GTCACCCATT GTTAGTAGGC TTACTGGATC ATGCGGATAC 
CCTGTACCTG ACCCTGTGGC CGTGGCCCAG GGAATGTCCA TGACCTCCCA AGACTCATTA
ACAGTACTGG ACACCTACGG CTTCATTAGG CACCTCGGTG AGTTAACGGT ATCCTCAGTG
AGGGGTTCCA TGGTTATAGC AGTCATTGAC CTATGGGACA TTAGACCCCT CTGCAGGTTA
GTTAACCTAC CGTGCCTTGA GCCTTGGGAT GAGGATAGCT TAAGCGTCGC GTTAAATGAG
GCTTTTCAAT ATAGTTCAGT TGTGGAGAAG CCATACATCA TTAGGCTTAA CCCCCTCTTA
TCAAGGTCAC TTTGCCCCAG GCTTAATGAG GTTAAGGTAC TGGTTAATAG GCCTGTCTTC
AATAGGAATT GGGGTATTGG GAATAGGTGG AGGTTACCTG AACAATGGGG TAATAATGAT
GAGCGGGTTA AATTAATCCT AAGTAGGGCC AGGGAACATG TGAAGAGTGG TGACGTATTA
GTTGAGGGTT ACCTGCCAGC TGACTCATCA GCATCAAGGA GCCTCTACGT TAATCCACTA
CCCATTAATG AACTCTCAGG GGTTAAGATT GTTGAGGAGG CTAGGCCATT CATGATTAAT
TTAATCAAGG GGGTTAACCC AAATGTTGAG TTCAAGGATT CTAAGGCTAA GTTCGACTCA
ATAGTGAGGG ATGCCTGGAG GGTGATTGAT AATGGACCCA TTGATCCAGC TGCATTAATA
AGATTCTGCC TACTTAAACT AGTGAGGGAG GGTAGGCTTG GTAATGTACC TATAGTGGTT
TCCTCACCAT ACCTAATTAG GTGGAGTGAA ACGGTAATGC GGCCTGACTA TAACCCAAAC
CCCACCTACT TCATGCCCAG GAACATTAAT GATATCACGG ATGCAACCCA CATTAATCCA
CTAGCCTTAG TTAAGGGTAT TGGGGATTAC TCATACGGTA GTAAGGTAAC CGTGGTGACA
TCATGTGATG TATACGATGA TGCGGGTGAT GGCTCAATTG TAATTATTAA TGACCAATGC
CCACCCCCAG CCAATGTAAG CGTCATAGAG GTTAATGGGG GTGTGGAGCT TGATAGGGTA
TGTCAATTAA TAACCAGTAC CCTAGATAAT GGTGGCGTAG CCTGGATTAG GCTTAGCGGG
TTTAGAAGTG AATTAAAGGC TGTAGTTGAC AGGAACCTAT GTGACCTATG CGGTGACTGC
ATTGCACTTA AGTGCAGTGC AATAACTACT GATGAGCAGG GTTACCCAAG GATTAATACT
GATGAATGCA TTGGGTGCGG GTTATGCGTA AGCGCATGCA GTAGGGGTGC CATAACACTG
TTTAAGCCAG GATCCTAA
 
Protein sequence
MKAILQRSPI VSRLTGSCGY PVPDPVAVAQ GMSMTSQDSL TVLDTYGFIR HLGELTVSSV 
RGSMVIAVID LWDIRPLCRL VNLPCLEPWD EDSLSVALNE AFQYSSVVEK PYIIRLNPLL
SRSLCPRLNE VKVLVNRPVF NRNWGIGNRW RLPEQWGNND ERVKLILSRA REHVKSGDVL
VEGYLPADSS ASRSLYVNPL PINELSGVKI VEEARPFMIN LIKGVNPNVE FKDSKAKFDS
IVRDAWRVID NGPIDPAALI RFCLLKLVRE GRLGNVPIVV SSPYLIRWSE TVMRPDYNPN
PTYFMPRNIN DITDATHINP LALVKGIGDY SYGSKVTVVT SCDVYDDAGD GSIVIINDQC
PPPANVSVIE VNGGVELDRV CQLITSTLDN GGVAWIRLSG FRSELKAVVD RNLCDLCGDC
IALKCSAITT DEQGYPRINT DECIGCGLCV SACSRGAITL FKPGS