Gene Cmaq_1178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1178 
Symbol 
ID5709330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1236493 
End bp1237032 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content44% 
IMG OID641275679 
Productribosomal-protein-alanine acetyltransferase 
Protein accessionYP_001540995 
Protein GI159041743 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID[TIGR01575] ribosomal-protein-alanine acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.165721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGTGG TCACTGAGAA GCTTGAAGGT GCTGAGGAGA TTACTGGTAA GGGTGGTGTT 
AAGTTCATTA TTAAGGAGTT TGATATGAGT GACTTGGAGG ATGTTATTAG GATTAATAGG
GCTGTCTTAC CTGAGAATTA CCCATCATAC TTCTTCGTTG AGCATCACTT ATCATTCCCC
AAAGCCTTCA TTGTGGCTAA GGTTAACGGT GAGACGGCTG GTTACGTAAT GAGTAGGGTT
GAGTTCGGCT GGTCTAATTT AAGGAAGGGG AGTATAGTGA GGAAGGGGCA CATTGTATCC
ATTGGTGTTC TACCCCAGTA TAGGAGGATT GGGATTGGGT ATAATTTAAT GGTTAGGTCA
ATGAGGGCTA TGAAGCACTT CTACAAGGCC AGTGAGGTTT ACCTGGAGGT TAGGGTTTCT
AATAAACCAG CCATTAGCCT ATATGAGAAG TTAGGCTACG TGATTGTTGA TGTGGTTAAG
GGTTATTACC ATGATGGTGA AGACGCCTAC ATCATGGCCG CATACCTCGA TAAGTACTAG
 
Protein sequence
MGVVTEKLEG AEEITGKGGV KFIIKEFDMS DLEDVIRINR AVLPENYPSY FFVEHHLSFP 
KAFIVAKVNG ETAGYVMSRV EFGWSNLRKG SIVRKGHIVS IGVLPQYRRI GIGYNLMVRS
MRAMKHFYKA SEVYLEVRVS NKPAISLYEK LGYVIVDVVK GYYHDGEDAY IMAAYLDKY