Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1080 |
Symbol | |
ID | 5709355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1130799 |
End bp | 1132016 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641275580 |
Product | metallophosphoesterase |
Protein accession | YP_001540899 |
Protein GI | 159041647 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000806376 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.987184 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCATTG CGCACATATC TGATGTGCAC TTAGGTAGGA GGCAGTATGG GCTTGAGGCT AGGGCTAGGG ATTATGAGGC AGCGTTCCTT AATGCTATTA GTGAAATCAT TAAGTTACGT GAGGAGAGGG GGGTTGATGT TGTCCTTGTT ACGGGGGATC TATTCGATAA TCCAAGGCCA TCCCCATCAA CCTACCTAAC CGCAATTAAG GGTTTTAGTA GGCTTAGGGA TTCAGGCCTT AATGTTATTA TAACCAGGGG TAATCATGAC GCTTCCGTTA TTAATCCTGT GGATAACCCA ATAAGCGTAC TATCATCATC AGGCCTGGTT AAGTACCTTG ACTTGGATTA CATTGATTAC GGTAAGTTAA GGATCATTGG TGTAGGCTGC GTACCCGGTA GTGAACATGG TAAACTCACC AGGGGTTTAA GGGGGTTAAT GGGGGGTGGT TTAAACATAG TCATGATGCA TCAGTACATT GAGGGTGCAC CGTATAGGTA CCCTATGCCT AACATTGACT ACTACAGTAT ACCCGCTGAT GAACTTCCAA TAGACGCCTA CTATGCGGTG GGTCATATTC ATGAACACGC CTTGAGGCAT CCATCATTAA ACGCAGTTTA CCCTGGTTCC CTTGAGATCT GGGATTCCCA GGAGTTTGAA ACCTACGTTC TTAATAATGG TAAGTTAAGT AAGGTTAAGG AACAGGACCC TAAGGGTTTC CTGCTACTGG ATGTTAATGA AGGTGCCGGT AGGGTTAAGG TTGAGCCAGT TAGGCTGCAT GGAGGGCGTA GGATGATTAA AGTCCTGGTT AATATTAATG GTGAATCACC ATCAGTATTC AGGGAGCATT TAAGTGAGTT AAGTAGCCTT AATTACAGGG ACGCCTACGT TGAGGTTAAC GTAACCGGTG AATTAAGTGA GGGCTTCAGT GTTAGGGATT ACGGCTTCAA TACTATTAAG GGTTTAATAA GTGATGCACT TAAGGTCAAC GTTAAGTTAA CGGTCACGAG GCGTAGTAGC GTTAAGGGGC AGGTTGTGCA TGGTTTAATT GAACTTATTC AATCAGTACT AGGTAAGAAC CTTGGTAATG AGGCTATGGT TAACGCAGTC CTTAGGGCCC TTGACCTGGT GAGTGATGGT AAGGTTAATG AGGCTAGGGT TACTTTAGAG AAGGCGCTTG GTATAGGGGA TGATGCTGAA TGGCTTCAGT GGAGTTAA
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Protein sequence | MLIAHISDVH LGRRQYGLEA RARDYEAAFL NAISEIIKLR EERGVDVVLV TGDLFDNPRP SPSTYLTAIK GFSRLRDSGL NVIITRGNHD ASVINPVDNP ISVLSSSGLV KYLDLDYIDY GKLRIIGVGC VPGSEHGKLT RGLRGLMGGG LNIVMMHQYI EGAPYRYPMP NIDYYSIPAD ELPIDAYYAV GHIHEHALRH PSLNAVYPGS LEIWDSQEFE TYVLNNGKLS KVKEQDPKGF LLLDVNEGAG RVKVEPVRLH GGRRMIKVLV NINGESPSVF REHLSELSSL NYRDAYVEVN VTGELSEGFS VRDYGFNTIK GLISDALKVN VKLTVTRRSS VKGQVVHGLI ELIQSVLGKN LGNEAMVNAV LRALDLVSDG KVNEARVTLE KALGIGDDAE WLQWS
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