Gene Cmaq_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1080 
Symbol 
ID5709355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1130799 
End bp1132016 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content45% 
IMG OID641275580 
Productmetallophosphoesterase 
Protein accessionYP_001540899 
Protein GI159041647 
COG category[L] Replication, recombination and repair 
COG ID[COG0420] DNA repair exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000806376 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.987184 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCATTG CGCACATATC TGATGTGCAC TTAGGTAGGA GGCAGTATGG GCTTGAGGCT 
AGGGCTAGGG ATTATGAGGC AGCGTTCCTT AATGCTATTA GTGAAATCAT TAAGTTACGT
GAGGAGAGGG GGGTTGATGT TGTCCTTGTT ACGGGGGATC TATTCGATAA TCCAAGGCCA
TCCCCATCAA CCTACCTAAC CGCAATTAAG GGTTTTAGTA GGCTTAGGGA TTCAGGCCTT
AATGTTATTA TAACCAGGGG TAATCATGAC GCTTCCGTTA TTAATCCTGT GGATAACCCA
ATAAGCGTAC TATCATCATC AGGCCTGGTT AAGTACCTTG ACTTGGATTA CATTGATTAC
GGTAAGTTAA GGATCATTGG TGTAGGCTGC GTACCCGGTA GTGAACATGG TAAACTCACC
AGGGGTTTAA GGGGGTTAAT GGGGGGTGGT TTAAACATAG TCATGATGCA TCAGTACATT
GAGGGTGCAC CGTATAGGTA CCCTATGCCT AACATTGACT ACTACAGTAT ACCCGCTGAT
GAACTTCCAA TAGACGCCTA CTATGCGGTG GGTCATATTC ATGAACACGC CTTGAGGCAT
CCATCATTAA ACGCAGTTTA CCCTGGTTCC CTTGAGATCT GGGATTCCCA GGAGTTTGAA
ACCTACGTTC TTAATAATGG TAAGTTAAGT AAGGTTAAGG AACAGGACCC TAAGGGTTTC
CTGCTACTGG ATGTTAATGA AGGTGCCGGT AGGGTTAAGG TTGAGCCAGT TAGGCTGCAT
GGAGGGCGTA GGATGATTAA AGTCCTGGTT AATATTAATG GTGAATCACC ATCAGTATTC
AGGGAGCATT TAAGTGAGTT AAGTAGCCTT AATTACAGGG ACGCCTACGT TGAGGTTAAC
GTAACCGGTG AATTAAGTGA GGGCTTCAGT GTTAGGGATT ACGGCTTCAA TACTATTAAG
GGTTTAATAA GTGATGCACT TAAGGTCAAC GTTAAGTTAA CGGTCACGAG GCGTAGTAGC
GTTAAGGGGC AGGTTGTGCA TGGTTTAATT GAACTTATTC AATCAGTACT AGGTAAGAAC
CTTGGTAATG AGGCTATGGT TAACGCAGTC CTTAGGGCCC TTGACCTGGT GAGTGATGGT
AAGGTTAATG AGGCTAGGGT TACTTTAGAG AAGGCGCTTG GTATAGGGGA TGATGCTGAA
TGGCTTCAGT GGAGTTAA
 
Protein sequence
MLIAHISDVH LGRRQYGLEA RARDYEAAFL NAISEIIKLR EERGVDVVLV TGDLFDNPRP 
SPSTYLTAIK GFSRLRDSGL NVIITRGNHD ASVINPVDNP ISVLSSSGLV KYLDLDYIDY
GKLRIIGVGC VPGSEHGKLT RGLRGLMGGG LNIVMMHQYI EGAPYRYPMP NIDYYSIPAD
ELPIDAYYAV GHIHEHALRH PSLNAVYPGS LEIWDSQEFE TYVLNNGKLS KVKEQDPKGF
LLLDVNEGAG RVKVEPVRLH GGRRMIKVLV NINGESPSVF REHLSELSSL NYRDAYVEVN
VTGELSEGFS VRDYGFNTIK GLISDALKVN VKLTVTRRSS VKGQVVHGLI ELIQSVLGKN
LGNEAMVNAV LRALDLVSDG KVNEARVTLE KALGIGDDAE WLQWS