Gene Cmaq_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1079 
Symbol 
ID5709567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1130372 
End bp1130680 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content41% 
IMG OID641275579 
Producttwin arginine-targeting protein translocase 
Protein accessionYP_001540898 
Protein GI159041646 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1826] Sec-independent protein secretion pathway components 
TIGRFAM ID[TIGR01411] twin arginine-targeting protein translocase, TatA/E family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000641532 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.697921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGGTA GTGTTTGGGA TTGGATAATA GTGATTGCGG TGGTGTTAAT ATTGTTTGGT 
GGTGCTAGTA AGATTCCTGA GTTGTTTAGG GCGTTGGGTA GGGCTGTGGG TGAGTTTAAG
AAGGGGCAGG TTGAGGTTGA GAGGGAGCTT AGGCAATTAA CCAATGAACC CCAATCAAAC
CAAACCAACA TAAGTAAACA AGACAACACA GTGAATAATA AGGATGAGGA AGCCCAGGAA
TTAAGAAGGC AGATAGAGGA ATTAAGAAAG AAAATCGAGG AATTAGAGAG GAAGAAATCA
CAGAATTAA
 
Protein sequence
MIGSVWDWII VIAVVLILFG GASKIPELFR ALGRAVGEFK KGQVEVEREL RQLTNEPQSN 
QTNISKQDNT VNNKDEEAQE LRRQIEELRK KIEELERKKS QN