| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1073 |
|---|
| Symbol | |
|---|
| ID | 5710372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 1124180 |
|---|
| End bp | 1124863 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641275573 |
|---|
| Product | metal-dependent hydrolase |
|---|
| Protein accession | YP_001540892 |
|---|
| Protein GI | 159041640 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.316137 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.112797 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTACT TGAAGTGGCT TGGGCATGCG GCCTTTGAAG TGGAATTAAT GGGTAAGAGA
ATACTTATTG ACCCATGGAT ATCAAACCCC AATTCCCCAG TAACCCTAGG TGAGTTAAGT
AAGGTAGACT TCATACTGGT GACCCATGAT CACTCAGATC ACTTGGGTGA GGCGGTTCAA
ATAGCCAATA AGACTAACGC CACGGTTGTA TCAATATTCG AGCTAGCCGT TTACCTAGCC
GAGAAGGAGG GGGTTAAGAA CACCATAGGT ATGAACATTG GTGGACCCGT TAAATTAACT
AACGAGATAG AGGTTTACAT GACTCCAGCA CTACACAGCT CAACCCATGG TTCACCAGTA
GGCTTCGTAA TTAAGTCCCC TGAGGCCGTT ATTTATCACG CCGGTGACAC GGGTTTATTC
AGTGACATGG AGTTGATAGG CAGATTATAT AAGCCTGACG TGGCCCTACT ACCCATAGGC
GGTTACTTCA CAATGAGTCC ACGGGAAGCG GCCTACGCAG TATCCCTAAT AAACCCCAGG
GCTGTGGTGC CAATGCACTA CAACACCTTC CCCCAGATTA GGCAGGATCC TGAGGAATTC
AGGAACCTAA CCGAGTCCCT AGCCCCCCAC GTGAGGGTTT ACGTGATGAA GCCTGGAGAT
GTACTTAACC TGCCTATTAA GTGA
|
|---|
| Protein sequence | MGYLKWLGHA AFEVELMGKR ILIDPWISNP NSPVTLGELS KVDFILVTHD HSDHLGEAVQ
IANKTNATVV SIFELAVYLA EKEGVKNTIG MNIGGPVKLT NEIEVYMTPA LHSSTHGSPV
GFVIKSPEAV IYHAGDTGLF SDMELIGRLY KPDVALLPIG GYFTMSPREA AYAVSLINPR
AVVPMHYNTF PQIRQDPEEF RNLTESLAPH VRVYVMKPGD VLNLPIK
|
|---|
| |