| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1049 |
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| Symbol | |
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| ID | 5710089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1099685 |
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| End bp | 1100635 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641275549 |
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| Product | protein of unknown function RIO1 |
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| Protein accession | YP_001540868 |
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| Protein GI | 159041616 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0478] RIO-like serine/threonine protein kinase fused to N-terminal HTH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.290796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00000000362034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCATAA GTAACGTAAT AGCCTCCTAC AATGAGTTAA GTAAACTCGA CTTAAGGGTG
CTTAGGGTAA TTGAGGTCCT CCACAGGAAT CACGAGTACG TTCCGGTTAA GAGGATTGTG
AATTACATGG GTTTAAGTGA GGAGGTTATT GATAAGTCTA TTTCAAAGAT GAATAAGCTT
AAACTACTGG TTAGGAGGGG GCCTGATAAC GTTAGGTTAA CATTCCCAGC CTACGACATA
CTGTCAATAC ACACCATGGT TAAGAAGGGT GTTATAGATG CCATAGCCCC AACACCCCTT
GGTGTTGGTA AGGAATCAGA CGTATACGCT GCTGATGCGC CAAATGGGGA AAAATACGCC
TTAAAGTTCC ATAGGATTGG TAGAGTTAGT TTCAGGAATA CTAGGAAGTA TAGGGTTTGG
ATTGGGGAGA GGAGGCATGT TACTTGGCTT TACGAAGCTA AGATATCAGC ACACATGGAG
TACCTAGCGT TAACCGAAGC CTATAAGGCT AAGGTACCTG CACCAAGGCC TAGGGCTGTG
ACAAGGCACT TGGTGGCCAT GGAGTACGTT AATGGTGTTG AATTATTTAG GGTTAAGTTA
AGTAATCCTG AGGATGTTCT TGAACAGATT ATTTCAGCCA TTGAGGATCT CCTGAGGATA
AACATTATTC ACGGTGACTT AAACGAATAC AATATCCTAG TTAATCCAAG TGATGAGAAA
ATAACAATAA TAGATTGGCC CCAGTGGATG TACGCTAACG TTAAGGGATC TAGGGTAATC
CTAATGAGGG ACCTCAACAT TATACTGAGG CACTTTAAGT CAAACTACGG GTTAAACGTA
GGCATTGATG CAGTTATGAG TAGGCTAGCC CCATTAATAC CGAACAGTGA ATTACCACCT
GAGAAGGCGT ACTCCAGGTT AATTAAGAGA GTAACATCCT TAGTTAAATG A
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| Protein sequence | MSISNVIASY NELSKLDLRV LRVIEVLHRN HEYVPVKRIV NYMGLSEEVI DKSISKMNKL
KLLVRRGPDN VRLTFPAYDI LSIHTMVKKG VIDAIAPTPL GVGKESDVYA ADAPNGEKYA
LKFHRIGRVS FRNTRKYRVW IGERRHVTWL YEAKISAHME YLALTEAYKA KVPAPRPRAV
TRHLVAMEYV NGVELFRVKL SNPEDVLEQI ISAIEDLLRI NIIHGDLNEY NILVNPSDEK
ITIIDWPQWM YANVKGSRVI LMRDLNIILR HFKSNYGLNV GIDAVMSRLA PLIPNSELPP
EKAYSRLIKR VTSLVK
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