Gene Cmaq_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1020 
Symbol 
ID5710129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1071048 
End bp1071590 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content43% 
IMG OID641275521 
Producthypothetical protein 
Protein accessionYP_001540841 
Protein GI159041589 
COG category[S] Function unknown 
COG ID[COG1656] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.134843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGCTA TAGGTTTAGT TAAGCCATGT GAGGTTACTA GGGGGATTGT TTACGTTGAC 
TCCATGCTTG GTTGGTTATC TAGATGGCTG AGGATGATTG GGGTAATGAC CATATATAGG
GATGACTTCA GTGATGATGA GTTAGCCGGC TTAGGTGGAT TAGTTATAAC TAGGGATAGG
GGTTTATTCA ATAGGCGGCG TGGCGATACC CTACTCCTCC TGACTGATAA TCATGTTCAT
TGGTTAGTTG CATCATTAAT GGTGCTTAAC GTTAAACCAA TCATAGGTGA TAACTCACTA
TGCCCAGTAT GCGGTGGTAG GTTAATTAAG GTGGATTCAA GGAATGCTGC TGGTGAAGTA
CCAGTTAACG TCATTAAAAG GAACCCCACA CTCCTCAAGT GCGAGTCATG CGGCAAGTAT
TACTGGGTTG GTAGTCATCA CAGGGGTATT GGACGTACAT TAAACATGGT TAATGAATTA
ATTAGTAAAT GCAGTATTAA GCATAATGGT TCTGAATGCC TAGTGAGCTG CCTCACCCTT
TAG
 
Protein sequence
MRAIGLVKPC EVTRGIVYVD SMLGWLSRWL RMIGVMTIYR DDFSDDELAG LGGLVITRDR 
GLFNRRRGDT LLLLTDNHVH WLVASLMVLN VKPIIGDNSL CPVCGGRLIK VDSRNAAGEV
PVNVIKRNPT LLKCESCGKY YWVGSHHRGI GRTLNMVNEL ISKCSIKHNG SECLVSCLTL