Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1020 |
Symbol | |
ID | 5710129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1071048 |
End bp | 1071590 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641275521 |
Product | hypothetical protein |
Protein accession | YP_001540841 |
Protein GI | 159041589 |
COG category | [S] Function unknown |
COG ID | [COG1656] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.134843 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGCTA TAGGTTTAGT TAAGCCATGT GAGGTTACTA GGGGGATTGT TTACGTTGAC TCCATGCTTG GTTGGTTATC TAGATGGCTG AGGATGATTG GGGTAATGAC CATATATAGG GATGACTTCA GTGATGATGA GTTAGCCGGC TTAGGTGGAT TAGTTATAAC TAGGGATAGG GGTTTATTCA ATAGGCGGCG TGGCGATACC CTACTCCTCC TGACTGATAA TCATGTTCAT TGGTTAGTTG CATCATTAAT GGTGCTTAAC GTTAAACCAA TCATAGGTGA TAACTCACTA TGCCCAGTAT GCGGTGGTAG GTTAATTAAG GTGGATTCAA GGAATGCTGC TGGTGAAGTA CCAGTTAACG TCATTAAAAG GAACCCCACA CTCCTCAAGT GCGAGTCATG CGGCAAGTAT TACTGGGTTG GTAGTCATCA CAGGGGTATT GGACGTACAT TAAACATGGT TAATGAATTA ATTAGTAAAT GCAGTATTAA GCATAATGGT TCTGAATGCC TAGTGAGCTG CCTCACCCTT TAG
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Protein sequence | MRAIGLVKPC EVTRGIVYVD SMLGWLSRWL RMIGVMTIYR DDFSDDELAG LGGLVITRDR GLFNRRRGDT LLLLTDNHVH WLVASLMVLN VKPIIGDNSL CPVCGGRLIK VDSRNAAGEV PVNVIKRNPT LLKCESCGKY YWVGSHHRGI GRTLNMVNEL ISKCSIKHNG SECLVSCLTL
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