Gene Cmaq_0951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0951 
Symbol 
ID5708835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp999412 
End bp1000392 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content40% 
IMG OID641275452 
Productmembrane dipeptidase 
Protein accessionYP_001540773 
Protein GI159041521 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCCGG TAATTGACTT ACATGAGGAC ATAGCGTATC ACTTAATGTT TGGTTCCAGG 
GTTCAGGACT TCAATATTGA TGCTGAGGGT AGGCAGTCTG ATATCCCCAA GCTTAAGCGT
GCTAATGTTA AGGTAATCTT CGCCTCAGTA TTCCCCATAT TAACTACCTA TAGTCCTAGC
CAGGATGAGG CAAGGGTGCG TTCCTCATTA CCCTACTCAA CTAAGGGTGT TGCCCTTGAA
ATGGTTAAAA CCTATTATAG ACTCATTGAT AGGTTTAATG ACTCATTATC CTTAATTAAT
AATGTTGAGG ATATTAATAA TATCTTTAAC ACCAGTAAGA TAGGTCTCCT AATATCAATG
GAGGGTGCTG ACGCCTTAGA GGATCCATAT GACTTAGTTA TCTTCCATAG ACTCGGCGTT
AATTCCATAG GAATTACGTG GAATTTTGAT AATAAGTATG GGGCAACGTG CTTCACTAAG
AAGGATTACG GATTAACAAA TTATGGAGAG GAATTAGTTA AGTTAGCTAA TAGGATTGGG
GTTATTGTTG ACCTAGCCCA CGCGAGTAGG AGAACAATGA TTGATGCATT ATCAATCTCC
AGGAAGCCTG TGGTGATAAG TCATAGTAAC TCTAAGGCAG TTAATAATCA CCCAAGGAAT
ACTGATGATG AGGTACTTGA GTTACTTAAA AGTAATGGCG GGGTAATAGG TGTAACCATG
ATTCCTGAAA CGATAGGACC CAAGCCGGCT GTTGATTCAT TAATACAGCA TATCAAGCAT
ATACGTGACA CGTTTGGAGC TGAGGTATTG GCATTAGGCA CAGATTACTT AGGCATTAGC
AGTACACCTC AGGGGCTTGA TAATATAGCG GATATTAGTA GGCTTGTTAA TGGGTTATTA
AATGCTGGAT TCAGTGAAAG GGAGGTGAGT GGTTTACTTT ATGATAATGC ATTGAGGGTA
ATTAAGGCAA ATTTAACTTA A
 
Protein sequence
MYPVIDLHED IAYHLMFGSR VQDFNIDAEG RQSDIPKLKR ANVKVIFASV FPILTTYSPS 
QDEARVRSSL PYSTKGVALE MVKTYYRLID RFNDSLSLIN NVEDINNIFN TSKIGLLISM
EGADALEDPY DLVIFHRLGV NSIGITWNFD NKYGATCFTK KDYGLTNYGE ELVKLANRIG
VIVDLAHASR RTMIDALSIS RKPVVISHSN SKAVNNHPRN TDDEVLELLK SNGGVIGVTM
IPETIGPKPA VDSLIQHIKH IRDTFGAEVL ALGTDYLGIS STPQGLDNIA DISRLVNGLL
NAGFSEREVS GLLYDNALRV IKANLT