Gene Cmaq_0812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0812 
Symbol 
ID5710078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp851835 
End bp853223 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content45% 
IMG OID641275315 
Productprotein of unknown function DUF395 YeeE/YedE 
Protein accessionYP_001540637 
Protein GI159041385 
COG category[R] General function prediction only 
COG ID[COG2391] Predicted transporter component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAACTGG AGACCCTTTA CGAGAAGGAT AGGAGAACTG TATGGATAGC CAGTTGGATT 
CTGCTGGCGT TAGCCCTTGG GCTACTGCTT GGGGGAGTGT ACATGCAGGT GGTTCTTCAT
GAGACTAAGG CACCGCTATT ACTTGGTATT GTGGCGGCAT TACCACTTGC TATTCCACTT
GAATTATGGA ACTTCTCTGA TCCTGACACA TTATTCAGAG TTATGGCATT ACAGGATAGA
TTCTTAGTTG CTTGCTTTGG TTTCGCAATA GGTTTAGGGG CAATACTACT ATATGGTCTT
AACCTGTTTA CTCATCCCAA CTTCGGCATT AAGGACCTAT TCATAGGTGG TATAATCCTA
GGTGGCCTAC TCTTTGGTGT GGGGGTTGGG TTAGCAGGCT ACTTCCCAGG CACCATATGG
ATAGCCCTTG GGCAGGGTAG GAGGGATGCA TTATATGCTG TGGCTGGTGG TTTACTGGGT
GCCTTCACTT GGTCAATGAT ATTTGGTTGG GCTAGGGGGC CATTATGGGA TACATTGAAC
TTCGGCCCAA TTACCTGGCC TAACTTATTC GGTATACCCT TCAGTGATAA AGTTGGGATG
TTCGCTGGCT CAATAGTATT CGGTGTATTA CTACTTCTAG TGTTCCTATT CCTACCAAGG
TACCCTAAGC AGCCCATTAA GCATGCCTGT GGATTCCACC TAGCTGGTGT TGGTAAGGAG
ACTGTGATTA GGTTTAGCGA TATGATGAAT GATGACTTAG TCAAGTACCC CAATCAGAAT
AGGTTCCTTG TTGAGTTAAT TAATGAGAGT AGTGTGAGGA ATGCTAGGTT CATAATGGTA
CTTGGCGCCG CCTTCACCAT CGAGGCTGTG GCGGTGATAA TATTGCATCA GATATTTGGT
GAATCAACAA CGTACTCATG GATTGGTGCC CAGTTATCGT ACTTAGTTAA CCCGTATTGG
GCTGCATCAA ACCCATACTT CCAATTATTC GGTGGAATGC ATATTGTTAA CGGTATACCT
GTGAATAAAC CCTTCAGTGA AATCGGCTGG GAACCAATAA CCGACTTAAG CACATTCATA
GGTGGTTTAG TGTCATCATT ATTCATATCA AGGAGATTCA TGGGTTTCAG GAACCAGATA
CCGAGGGTTT GGGCTCATAG GTTTGGTGAA TCAACGTGGA AGAGGTTCCT TGGTTCATTC
TTCGGAGCAT ACCTAGTACT ATTCGGTGCA AGGATGGCGA ATGGATGCGC CAGTGGGCAT
ATTTTAAGTG GGGATATTCA AATGGCTGTA TCCAGTGCAT TATTCCTAGT AATGGTAATG
ATTGGAAGCA TGCTAACCCT AAGATACGTG CTGAAGCTGA GGATAAACGC CTGGGGATAC
GTTCAGTGA
 
Protein sequence
MQLETLYEKD RRTVWIASWI LLALALGLLL GGVYMQVVLH ETKAPLLLGI VAALPLAIPL 
ELWNFSDPDT LFRVMALQDR FLVACFGFAI GLGAILLYGL NLFTHPNFGI KDLFIGGIIL
GGLLFGVGVG LAGYFPGTIW IALGQGRRDA LYAVAGGLLG AFTWSMIFGW ARGPLWDTLN
FGPITWPNLF GIPFSDKVGM FAGSIVFGVL LLLVFLFLPR YPKQPIKHAC GFHLAGVGKE
TVIRFSDMMN DDLVKYPNQN RFLVELINES SVRNARFIMV LGAAFTIEAV AVIILHQIFG
ESTTYSWIGA QLSYLVNPYW AASNPYFQLF GGMHIVNGIP VNKPFSEIGW EPITDLSTFI
GGLVSSLFIS RRFMGFRNQI PRVWAHRFGE STWKRFLGSF FGAYLVLFGA RMANGCASGH
ILSGDIQMAV SSALFLVMVM IGSMLTLRYV LKLRINAWGY VQ