Gene Cmaq_0619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0619 
Symbol 
ID5710214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp652231 
End bp653343 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content46% 
IMG OID641275121 
Productglycosyl transferase family protein 
Protein accessionYP_001540450 
Protein GI159041198 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATG CACCTGATGC ATCAATAATA GTACCAACAC TTAATGAAGC TGGTAACGTA 
GGTAGGCTTA TTGAGGAATT AGCCAGTAAC CTTAAGGGCA TTAACTATGA GGTGGTAATT
GTTGATGATG GATCAACTGA TGGAACCGTT AAGGTTGCTG AGGAGACTGC TAAGAAGCTT
GGGGTTAATC TTAAGGTTAT TGAGAGGGGT AGGAGACTTG GATTATCAAG CGCAGTGATT
GATGGTGTAA AGGCCAGTAG AGGGGGTATT ATTGTTGTAA TGGATGCTGA TTTACAACAC
CCACCATCAG TAGTGCCTAA GCTTATTGAG GCCGTTTCAA ACGGCGCTGA TTTAGCCGTC
GCTTCTAGGT ACATTAATGG TGGCGGCATA GCAGGTGATT GGCCCCTCCT TAGGAGGATA
ATAAGCCGTG GGGCAGTTAC CCTAGCCCAC ATACTAGTGC CCACAGCCAG GGATGTTAAG
GACCCTGTCT CAGGCTTCTT CGCAGTGAAG AGGAGTGCCG TATGCATAGA TAAGCCCCAT
GGTGACTACA AGATCCTCCT CGACATACTC GCCCTCTGTA GGGTTAGGAG GATAGTGGAG
GTTCCCTACG TTTTTAGAAC CAGGGAGGCT GGCTCATCTA AGCTAGGTAC TAGGCAAATA
ATAAACTACG TTAAGCAGAT TGCCTCAATA TCACTGAGTC TGCTTTCCCT AAGTGGTTAT
AGGCCCATTA AATTCGCCAT TGTCGGCGCA ATAGGCCTAG TTGTCTCAGA ACTGGTGCTT
CACGTATTCT GGAGGATACT TGGGTTAGCG TACTTCATAT CCCTCATACC AGCTATTGAG
GCGGGTATTG CTAATAACTT CACCCTAAAT AAGGTGTGGA CGTTTAAAGA CAGGTCAGTG
GGTTACTGGG TGGGGTTAGG TAAGTATCAT GTGGCTAGTT TAACCGGAAC AGCGGTGACG
TATGCTGTAA CGAACCTGCT TCACTACGGC CTAGGCGTAA ATGGTTACGT AGCATACGTA
ATAGGTGTTA TATTCGGTTT CATAGCCAAC TACATTATGG CCGAGGTCTA CGTCTTCAAA
TACCGGCGCA CGGGCACTGA TAATAACCTT TAA
 
Protein sequence
MSDAPDASII VPTLNEAGNV GRLIEELASN LKGINYEVVI VDDGSTDGTV KVAEETAKKL 
GVNLKVIERG RRLGLSSAVI DGVKASRGGI IVVMDADLQH PPSVVPKLIE AVSNGADLAV
ASRYINGGGI AGDWPLLRRI ISRGAVTLAH ILVPTARDVK DPVSGFFAVK RSAVCIDKPH
GDYKILLDIL ALCRVRRIVE VPYVFRTREA GSSKLGTRQI INYVKQIASI SLSLLSLSGY
RPIKFAIVGA IGLVVSELVL HVFWRILGLA YFISLIPAIE AGIANNFTLN KVWTFKDRSV
GYWVGLGKYH VASLTGTAVT YAVTNLLHYG LGVNGYVAYV IGVIFGFIAN YIMAEVYVFK
YRRTGTDNNL