Gene Cmaq_0608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0608 
Symbol 
ID5710437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp641310 
End bp642806 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content46% 
IMG OID641275109 
Productphenylalanyl-tRNA synthetase, alpha subunit 
Protein accessionYP_001540439 
Protein GI159041187 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0016] Phenylalanyl-tRNA synthetase alpha subunit 
TIGRFAM ID[TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.762809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTAT TACCACCATT ACAGTACAGT ATAATTAAAG TGCTGGTTGA GGTTAATGAG 
CCTATTGACG CAGATTCCTT AGCTAGTAAG GTGGGTAAGA GAACTGAGGA CATTATGAGG
GATCTTGAGG AACTTAAGGC AAGGGAGTTC ATTAGAATTG AATACCGGTT AGTCACGAGG
ATTGCGTTAA CAGACCTTGG TGAAGAGTAC TTAAGAATAG GCCTACCTGA GGAGAGGCTC
ATAGCCCGGT TAAGGGAATT GGGTGGTAAG GCTAACTTAA GTGAGTTAAG TCAATCAATG
AATTTAAGTA AGGAGGAGCT CACAGCCGCC TTGGGTAGGC TTAGGAGGCT TAAGGCAGTT
AACCTAAGTG GTAGTGTAAT TAACTTAACC GGTGATGAGG GTGAATTCAG GAATTACATT
AATGAACTTA AAACATTCCT AAACAACATT AAAGGTGAAG TAGAGTACAC TGGTGAATTA
CCTGAATACG TAGAGGAGGC TAGGCGGAGG GGACTTGTTA AGGTTCATCA AGTGAAGAGA
CTCATAGTGG CTGCGACCCA GGAGGCCTTA AACCTTTATA GGAGTGGTCA ATTAACCAGT
GCAAGGGTAA TAACCAGCCT AACCTCAGCT GACTTAGCCT CAGGTTCCTG GAGGGGCGGG
GTCTTTAAGG AATTTGACTT AACGGTGGAG GTGCCTTTAA GGCCTATTAG GCGTAAGCAC
CCCTTCATTC AGTTCCTAAA TCAGGTTAGA GATGAGTTAG TGGCCATGGG GTTTGAGGAG
GTTAAGGATG AACACGTTGA TGCAGCCTTA TGGAACTTCG ACACCCTCCT AGTGCCTCAA
TACCACCCGG CTAGACGTGA AACCGACGTA TTCTACGTTG AGAACAAGCT AAAGCCAAGG
GAAGCCCCAG GGGAGGTTAT GGAGAGGGCT AGTGAGCAGC ATAGGTTAGT TTGGTCGTAT
GAGTGGAGTA GGGATGAGGC CCTTAGGGTA CTTTTAAGAA CACACACTAC ACTGGTTACT
ATTAAGCAGA TTTACCATAG GGGGCCGGGG GAGTATAGGT TGTTTTCACT TGATAGGGTT
TACAGACCTG ATACACCCGA TGCCACGCAC TTCATGGAGT TTCACCAGCT TGAAGGCATA
ATAGTGGGTA GGGGGGTTAC CTTCAGGAAT CTACTGGGCT TCTTCACCGA GCTTGCTAAT
AGGCTTAGGC TTGGTAGGGT TTACTTTAAG CCGGCGTACT TCCCCTTCAC TGAACCGAGC
GTTGAAGGTT ACGTGAAGCA CCCGAAGCTT GGTCAACTTG AGGTTTTCCC CGGAGGCATG
TTTAGACCTG AGGTGCTTAG GATAGTTGGC TTAGGTAGTG AGTATAAGGT TGCGGCTTGG
GGTGTTGGGA TAGATAGGTT GGCAATGGTT GTCCTTGGCG TTGATGATAT TAGAACCCTC
TACACTAATA ATGTTAAGGA AATAGACTCA ATGAAGACTC CCATTGGGGT GATTTAA
 
Protein sequence
MIVLPPLQYS IIKVLVEVNE PIDADSLASK VGKRTEDIMR DLEELKAREF IRIEYRLVTR 
IALTDLGEEY LRIGLPEERL IARLRELGGK ANLSELSQSM NLSKEELTAA LGRLRRLKAV
NLSGSVINLT GDEGEFRNYI NELKTFLNNI KGEVEYTGEL PEYVEEARRR GLVKVHQVKR
LIVAATQEAL NLYRSGQLTS ARVITSLTSA DLASGSWRGG VFKEFDLTVE VPLRPIRRKH
PFIQFLNQVR DELVAMGFEE VKDEHVDAAL WNFDTLLVPQ YHPARRETDV FYVENKLKPR
EAPGEVMERA SEQHRLVWSY EWSRDEALRV LLRTHTTLVT IKQIYHRGPG EYRLFSLDRV
YRPDTPDATH FMEFHQLEGI IVGRGVTFRN LLGFFTELAN RLRLGRVYFK PAYFPFTEPS
VEGYVKHPKL GQLEVFPGGM FRPEVLRIVG LGSEYKVAAW GVGIDRLAMV VLGVDDIRTL
YTNNVKEIDS MKTPIGVI