| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0553 |
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| Symbol | |
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| ID | 5710348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 586568 |
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| End bp | 587809 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641275056 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001540386 |
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| Protein GI | 159041134 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0770776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAGTG AACTGGGGGA TCAGTTGGCT GAATTAACCT CACGTCTAGT TCAAATAAAT
AGCGTTAATC CACCTGGTGA TGTAACCGGG GTTGTTGAAT TCATTAGGAA TTGGCTCAGT
GAAAGGGGAT TCTCAAGCAG TATTTACGAG TACGTTAAGG GTAAGCCCAA TTTAATAGCC
AGGGTAGGTA AGGGTAAGCC TATAATCATA CTGAATGGGC ACACTGACGT CGTACCACCA
GGTGACCCAG ATAAATGGAC CCACCCACCC TTCTCAGGTA GGGTTATTGA AGGAAGGGTT
TACGGGAGGG GTTCAACAGA CATGAAGGGT GGGGTAGCCG TCATAATGAT GGTTTTCGCT
AAGTTAGGGC CATTAATTGA GAAGGAGGGT GCTGGTTCAT TAGTCTTCTC CGCCACAGCT
GATGAGGAAG TTGGTGGTCA TGCCGGTGTT GAGGCCTTAG TTAAGGATAA TTTACTAGTG
GGTGATGCAG CCATAGTTGC TGAACCAACA GGCTTCGATA AGTACTGCAT AGCTGAGAAG
GGGTTAAGCC AAGTGAAGTT AATCACCAGG GGTAGGCCAG CCCACGGTAG CCTGCCTCTA
CTTGGTGATA ATGCAATAAT GAAGCTGTTC AAGGCTATTG ATAAGGCCCA GGGCATTATT
AATGAAGTGA ACAGGGATAT TAAGCTACCC CAGGATTTAA TCGAAGCCGT TAATAATTCA
GCAAAGGTCT ACCTGGAGGG GGCTTTAAGG AGCGGCCTAA GGTTAAGTGA GGATGATTTT
AAACGCGTAA TAGGCTCAGT ATCCTTCAAT CCAGGCGTAA TTAAGGGTGG ATCCAAGGTT
AACATGGTTC CAGACTACGC GGAACTGGAA TTAGACATGA GGGTACCACC CGGTGTCTCA
CCAAGTGCCG TTATTGATAG GTTAAGGAAC GGCTTAAGTG AATTAGCTGA AGTGGAGGTA
TTAGACACCA GTGAACCAAA CTACACACCC TCCAATGAGA GGATAATTCA ATTAATACGT
GAAGGCATTA GTAGACAAGG AGCTGAGGCT AAGCCAATAA TAATGACTGG GGCAACCGAC
GGAAGGTACT TGAGACTAAG AGGCATACCA ACGGTGATTT ACGGACCAGG TGAATTAACA
TTAGCACACA CTTATGATGA ATACGTAACC ATAAAGGACC TAGTGAACAC TCATAACACC
ATAAAATACA CTGTGGAGAA ATACTTAAGT TTAAAGCAAT AA
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| Protein sequence | MVSELGDQLA ELTSRLVQIN SVNPPGDVTG VVEFIRNWLS ERGFSSSIYE YVKGKPNLIA
RVGKGKPIII LNGHTDVVPP GDPDKWTHPP FSGRVIEGRV YGRGSTDMKG GVAVIMMVFA
KLGPLIEKEG AGSLVFSATA DEEVGGHAGV EALVKDNLLV GDAAIVAEPT GFDKYCIAEK
GLSQVKLITR GRPAHGSLPL LGDNAIMKLF KAIDKAQGII NEVNRDIKLP QDLIEAVNNS
AKVYLEGALR SGLRLSEDDF KRVIGSVSFN PGVIKGGSKV NMVPDYAELE LDMRVPPGVS
PSAVIDRLRN GLSELAEVEV LDTSEPNYTP SNERIIQLIR EGISRQGAEA KPIIMTGATD
GRYLRLRGIP TVIYGPGELT LAHTYDEYVT IKDLVNTHNT IKYTVEKYLS LKQ
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