| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0534 |
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| Symbol | |
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| ID | 5709765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 567994 |
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| End bp | 569523 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641275038 |
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| Product | hypothetical protein |
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| Protein accession | YP_001540368 |
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| Protein GI | 159041116 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000504729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.264906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTTAATAT TACTTTCCCT AAAGCTCATG GCTTACGCCC TATTATCCAT CATGGGTAAC
GCCTCATGCG TAATGGTTCC CAGTATAAAT AATACTGTAA TTAACCTAAC CCTTAACGGT
ACAGGCTTTG AATTAACATT AATTAAAAGT AATATTACTG TTACCGGCCT TAATTTAACT
TTAAATAATT ACTATAACGT ATCAATAATG GGTAAATACG CTGAGGAGTT CATGAAGCTT
GGTGAAGCCT ATTGTGAGGG ATCCTTCGGT AAAATGTACA TTATTGGTAA TAATGCTTAC
TTTATTAATT CAACAAGCAG TGGATTAATC GTCGGCGTCA CAGGTAACTT AACCATTAAT
GAGGTGTCGA TGACCTGCCC CATGGTACCT GCCTTGAATA CTCCATATAT TAAGGTTATA
TATATTAATG GAACTGGGTG CCTAATTACT ACTAAGTTAG GTGGAGGCGT GCACATGGCG
CGTAATATGA CTTCAGTTAA TTTAATGCTC AATGGTTTCA TGCCAATACC CTTTAAGGTC
ACCTTCAGTG GAATCTTCAA TACATACACC TACGGGGGTG GGTTGGGGCT TGGGAACGCT
TTCCCAACAA GCGTACTACT GGTAACTAAG TCCGCTGAAT TAGTGGCTAG GGTTGAGTCA
AGTGCACCGT TTTACCTCAG ATTCTATGTT TTCGATAATG TGACTAAAGG CTATAGCCTT
AACTATACAT TGAAGCCTAT AGTTTCCTTC GAAACCATAC CTTACACAGT GGTTATGTTC
ACTGGTAATG TAACAGACTG CAGGGTGTAT AATGTTACCG TCTACTTAAT TCACCCTGAA
AACATTATAC CTATACCGAT ACCTGTTAAT GAAAATGAGT CATTTGTGGT TGCACGCTAT
GTTGAAATCG AGTACACTAA TCCTCCCTCC AGTCTACTTT ACTTGATTGA ACCCGGTAAG
GTACTTATGG TAAGTAACCC AGTAAGTGAA GTAGGGTATA GTGTTGAGGC TTGTAAAGCA
ACTAGTGTGG AAGCTGCAGC CATTAATGAC CCATATGCAC TCCTATATAG GTCCACGGTT
AAATTACCCG TAACCATTAA CGCTACAACA CCCATGAAGG GGGCTTTAGC CATATTTAAA
TTATTCAATA ATGATACTGT TAAGGAGTTA TTAAGTAATG CCTTAAATTA CCCATGGAGC
CCACTGGTGG CTAGTGCCGC AGCCATGTAC CTCTATAGGG CCTCAGGGTA CCCGGCTAGG
GTTATCCTAG GCACTATACC CGTTAAGTAT GATGGGGAAT ACTTAGAGTA CGGTTACTTG
CCTTGGGTTG AATTATACTA CGGTGGTTGG ATTGACTTCA AACCCTACAG GGGCTTACCA
GTATCACCCA ATGGTGGTGG ATTAGGTGCA TTATTCACTA AGTATGGTAT AGTTAACTAC
GTGGGTGTTA GCGTACTTTT AGTGCTACCG GCGTTACTAA TTTATTACCT ATACCTTTAC
TTAACAGCGA GGGGTGTTTA CAGTGAGTGA
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| Protein sequence | MLILLSLKLM AYALLSIMGN ASCVMVPSIN NTVINLTLNG TGFELTLIKS NITVTGLNLT
LNNYYNVSIM GKYAEEFMKL GEAYCEGSFG KMYIIGNNAY FINSTSSGLI VGVTGNLTIN
EVSMTCPMVP ALNTPYIKVI YINGTGCLIT TKLGGGVHMA RNMTSVNLML NGFMPIPFKV
TFSGIFNTYT YGGGLGLGNA FPTSVLLVTK SAELVARVES SAPFYLRFYV FDNVTKGYSL
NYTLKPIVSF ETIPYTVVMF TGNVTDCRVY NVTVYLIHPE NIIPIPIPVN ENESFVVARY
VEIEYTNPPS SLLYLIEPGK VLMVSNPVSE VGYSVEACKA TSVEAAAIND PYALLYRSTV
KLPVTINATT PMKGALAIFK LFNNDTVKEL LSNALNYPWS PLVASAAAMY LYRASGYPAR
VILGTIPVKY DGEYLEYGYL PWVELYYGGW IDFKPYRGLP VSPNGGGLGA LFTKYGIVNY
VGVSVLLVLP ALLIYYLYLY LTARGVYSE
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