Gene Cmaq_0475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0475 
Symbol 
ID5710264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp514215 
End bp514793 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content50% 
IMG OID641274978 
ProductZPR1-related zinc finger protein 
Protein accessionYP_001540310 
Protein GI159041058 
COG category[R] General function prediction only 
COG ID[COG1779] C4-type Zn-finger protein 
TIGRFAM ID[TIGR00340] ZPR1-related zinc finger protein
[TIGR00310] ZPR1 zinc finger domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.08439e-12 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.000534132 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGAGTT TAGAGGGTTT AAGCAGTTAT GCTGAGGGAG TCTATGAGGT TACGGATAAG 
TGCCCAGTCT GCGGTAATAG GACACTAACC ATTAGGGGTG TGGTTTATAA TACGCCCTAC
TTCGGTAGGC TCCTCCTGGA GGTGATGAAT TGCTCAACCT GCGGTTTCAG GTACATGGAC
ATTACTTACC TTGACAGTAA GGGGCCTGTT AAATTAACAT ACAGGGTTAC GGATAGGGTT
GATGTTGAGA GGACTTGGGT AATTAGGTCA GCTGAGGCTA AGGTCTACTC CCCCGACCTA
GGCTTCACAC TGGCTCCAGG ATCAGCGGGT GAGGCCATGA TAACGCCCCT GGAGGGCCTA
ATATATAGGT TAATACAGTA TGCTGAAGCC ATGCGTGGGC TTGAGGGGGA GGCTGAGGCA
AGGAGGCTGG CATTCATTAG GGAGGCTAAT GAGGCCCTTA ATGGGTTCAG GGAATTCACA
TTAATCATAG AGGACCCTAC TGGAAACAGC ATAATTAAGC CACCACCGGG TAGGGAGGGT
AGGCTTAAGG AGGATAGGCT TGAGGTGCCT CAGGGATGA
 
Protein sequence
MESLEGLSSY AEGVYEVTDK CPVCGNRTLT IRGVVYNTPY FGRLLLEVMN CSTCGFRYMD 
ITYLDSKGPV KLTYRVTDRV DVERTWVIRS AEAKVYSPDL GFTLAPGSAG EAMITPLEGL
IYRLIQYAEA MRGLEGEAEA RRLAFIREAN EALNGFREFT LIIEDPTGNS IIKPPPGREG
RLKEDRLEVP QG