Gene Cmaq_0460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0460 
Symbol 
ID5709609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp499120 
End bp499437 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content44% 
IMG OID641274963 
Productribosomal protein S17E-like protein 
Protein accessionYP_001540295 
Protein GI159041043 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1383] Ribosomal protein S17E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.160081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTAGAA TTAATCCTCA TGCTAAGAAA CGCTTAAAAC CACCGACTCA ACATCGTTGC 
TTAATGGGTA AGGTTAGGCC AGCTTACATT AAGAGGGTTG GTAGAATGCT TATGGAGCAG
TACCCTGATA GGTTTACTGA GGACTTTGAG CATAATAAGC AGGTGGTGGG TCAATTAGTT
GAGGGGGTTT CGAAGAAGGT TAGGAATAGG ATTGCAGGCT ACATAACATC ACAGGTTAAG
CGCATTAAGA CTGCTGGCGA GGAGGAAGAG GTTGAGGAAA GTGAAAGTGT AAAAACCAGT
AGTGAGGGTG GTTCCTAA
 
Protein sequence
MFRINPHAKK RLKPPTQHRC LMGKVRPAYI KRVGRMLMEQ YPDRFTEDFE HNKQVVGQLV 
EGVSKKVRNR IAGYITSQVK RIKTAGEEEE VEESESVKTS SEGGS