| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0458 |
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| Symbol | |
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| ID | 5709933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 497707 |
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| End bp | 498327 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641274961 |
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| Product | proteasome endopeptidase complex |
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| Protein accession | YP_001540293 |
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| Protein GI | 159041041 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03634] proteasome endopeptidase complex, archaeal, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.180759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGTAGGA TTCATAATGA TCCAAAGGTC CTATTAACTG GAACAACAAC AGTGGGTGTG
GTTACTAAGG AGGGTGTTGT ATTAGCCACT GACAGGAGGG TTACCGCAGG CTACTACATA
GCTCATAGGA AGGGTAGGAA GATATGGAAG ATTGATAACC ACGCGGCAGC AACAATGAGT
GGGGCAGTGG CTGATGTACA AATGATACTA AATGAATTAA CCCACTTAGC AATGAACTAT
AGGATAACGC ACCAAGCCCC AGTACCAATT AAGACGCTAG CTAACTATGC CTCAGTAGTC
ATGTTCTACA GCAGGCCGAT GATATACATA GCCCACATGA TAATAGGTGG AGTGGATAAT
GAGGAGGGGC CGGTCCTATA TGCGGTTGAC TGGTACGGTA GCTTCACAAG GGAGGAACGC
TTCATGTCAA CGGGCAGTGG TTCACCAACG GCCTTCGGTG TGCTTGAGGA TGGTTATAGG
GATGACATGA GCCTTGATGA TGCTGTTAAG CTAGCCACCA GGGCGGTTAG AGCGGCGATG
CTTCATGACC CAGGAAGTGG AGAGGGTGTT GACGTCATAA CCATAACTAA GGAGGCTGGG
TATAGGGAAG TACAGGCTTA A
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| Protein sequence | MSRIHNDPKV LLTGTTTVGV VTKEGVVLAT DRRVTAGYYI AHRKGRKIWK IDNHAAATMS
GAVADVQMIL NELTHLAMNY RITHQAPVPI KTLANYASVV MFYSRPMIYI AHMIIGGVDN
EEGPVLYAVD WYGSFTREER FMSTGSGSPT AFGVLEDGYR DDMSLDDAVK LATRAVRAAM
LHDPGSGEGV DVITITKEAG YREVQA
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