| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0455 |
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| Symbol | |
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| ID | 5708525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 492268 |
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| End bp | 494178 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641274958 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001540290 |
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| Protein GI | 159041038 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1782] Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain |
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| TIGRFAM ID | [TIGR03675] arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.263173 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTTA GACCTGATAT AGAGGAGAAG ATTATTAAGA TGCTGCCTGA GGAGGCTAAG
GTAACTAGGA TTGAGTTTGA GGGGCCTCAC GTATCCATAT ACTCACTTAA CCCAGGCTAC
ATCATGAGTA ATAGTGAGTT AATAAAGATG CTTGCTAAGG AGCTTAAGAA GCACATTATA
ATTAAGGGTG ATGAGAAGGC TAGGGCACCT AAGGAGGAGG TTGAGAAGGT TATTAGAAAG
ATGATAACTG ATGGTGGTAA TGAGGTTGAT AAAATTTACT TCAATGATCA ATTAGGTGAT
GTCTACATAT TCCTTAGGAA ACCCCAGGTA ATTAAGGGTC TTGATAAAGC TATATTATCT
CAAACAGGTT GGAGACCAGT AATAGTTACA ACAGCCCTAG ATATGTCTAA GGGTTTACCT
AGGGATGACA TTGATGCTGT TAACAATGTG GATATGTTGA TGAGTAAGGA GAGGGCGGAG
TTCCTGAAGA GCATTGGTTT AAGGATACAT AGGCTACCGG TGTATAAGAA TGAGTACGTT
AAGGTAACTT GCCTAGGCGC ATGCTTCGAG GTGGGTAGGA GTGCGTTGCT TATTGAGACC
AGTGAAAGCA GGGTCCTACT TGATGCGGGT GTTAAGCCCA GTGGGGGTAT GGATGAGGCT
CCGTTCTTTG ACGTAATAGA TGTTGATAAC CTGGACGCTG TGGTGATTTC CCATGCTCAC
CTGGATCACA TAGGTATGCT ACCCTACCTA TACAAGTATG GTTACAAGGG TCCAGTATAC
ATGACTGAGC CAACCAAGTA CCTAATGGAG ATTCTCTTAA CTGATTACAT AGACTTATCC
TCTGAGCGTG GTTACTCTTA CTATGGGTTA AGTGAATTAG CTTCAAGCCT ATACCACAGC
GTCACGGTGG ATTACGGTGA TGTTACTGAT ATTTCACCTG ACATTAAGTT AACGCTCTAT
GATGCTGGTC ATGAGATTGG TTCAGCCTTA TCCCACCTTC ACATTGGTAA TGGGTTATAT
AACATAGTTT ACACCGGTGA CTTCAAGTAC GGTCCCTCTA GGTTACTTAA CCCAGCCCAC
AGTATCTTTA AGCGCGTGGA ATTACTCATA ATGGAGTCAA CCTACGGTGG TAAGGATGAT
GTTCAGAAGC CTAGGGAGGA GGCTGAGGCT GAGTTAATTC AACTGGTTGG TAAGACCCTT
GAAAACGGTG GTAAGGTGCT TATACCAGTC TTCAGTACAG GTAGGGCTCA GGAAATATTA
TTCCTACTTA ATGATTCAAT GCAGGCGGGT AAGTTAACTA AGGCCCCAAT ATACGTTGAT
GGTATGGTTC TTCAGACACT TAACGTCCAC TTAATGTTCC CGGATTACTT GAATAATAAT
GTTAAGGAGT TGATATACGA TGGGGTTAAC CCATTTATCT CAGAGTACGT TAAACCAGTG
GAGAGGGCTA GGAACCCTGA TAAGAGGCAG GAACAAGTCA TGGATATACT GCAGGGTCCA
CCATCAATAA TACTGGCGCC GCATGGTATG CTTAGTGGTG GGCCAGCCAT GGATTACTTC
GTCCATATGG CTGATGACGC CAAGAACAGT CTAATATTCG TATCATACCA GGGGGAGGGG
ACCCTGGGTA GGAGACTTAT TCAAGGTGAG CGTAAGGTTA ACTTAAAGTA CTATGACCAG
GATATCACCG TTAATGTTAA CATGAATGTA TTCCATGAAC CAGGCTTCTC AGGTCACAGC
GATAGGAAGC AGTTAATGAA CTACGTGGGT AGGATTGAGC CTAAGCCACA TAAGGTTATG
CTTGTTCACG GTGAACCAAG TAAGTTAATG AACCTGGCTT TAAGCATAGA GTTAAAGTAT
AAGATAGATA CAGTAATGCT TAACCACCTT GAGTCAATTA GGTTAGTTTA G
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| Protein sequence | MALRPDIEEK IIKMLPEEAK VTRIEFEGPH VSIYSLNPGY IMSNSELIKM LAKELKKHII
IKGDEKARAP KEEVEKVIRK MITDGGNEVD KIYFNDQLGD VYIFLRKPQV IKGLDKAILS
QTGWRPVIVT TALDMSKGLP RDDIDAVNNV DMLMSKERAE FLKSIGLRIH RLPVYKNEYV
KVTCLGACFE VGRSALLIET SESRVLLDAG VKPSGGMDEA PFFDVIDVDN LDAVVISHAH
LDHIGMLPYL YKYGYKGPVY MTEPTKYLME ILLTDYIDLS SERGYSYYGL SELASSLYHS
VTVDYGDVTD ISPDIKLTLY DAGHEIGSAL SHLHIGNGLY NIVYTGDFKY GPSRLLNPAH
SIFKRVELLI MESTYGGKDD VQKPREEAEA ELIQLVGKTL ENGGKVLIPV FSTGRAQEIL
FLLNDSMQAG KLTKAPIYVD GMVLQTLNVH LMFPDYLNNN VKELIYDGVN PFISEYVKPV
ERARNPDKRQ EQVMDILQGP PSIILAPHGM LSGGPAMDYF VHMADDAKNS LIFVSYQGEG
TLGRRLIQGE RKVNLKYYDQ DITVNVNMNV FHEPGFSGHS DRKQLMNYVG RIEPKPHKVM
LVHGEPSKLM NLALSIELKY KIDTVMLNHL ESIRLV
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