Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0438 |
Symbol | |
ID | 5708586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 471342 |
End bp | 473822 |
Gene Length | 2481 bp |
Protein Length | 826 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641274941 |
Product | dolichyl-diphosphooligosaccharide--protein glycotransferase |
Protein accession | YP_001540273 |
Protein GI | 159041021 |
COG category | [R] General function prediction only |
COG ID | [COG1287] Uncharacterized membrane protein, required for N-linked glycosylation |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTAAGG CAGGGGGAGG GAAGAGAGGT AGTGCCGCTA AGGCGCCAAC TAAGACTAGG GTAAGCCTCA CTGATGCCGA GTTGAGGGAA TTAAGGTCAA CTCAGTGGTT TGGCTTATTG GCAGCATTAG CCGCAGCCTT CACTGCTGGG CTTTACATTA GGCTTTACCC AGCATTCCTA TGGGGTAATT ACATTAATGA GTTTGACCCA TACATTAGAT ACTACTTAAC GGAATTCATG CTTAAAATGG GGGTGGTTAA GGGTATTGAA TGGTGGCTCA GCGGGGGTTT AATTAATGGT AACCTTTACA TAAACACCCA TTTCTGGTAC CCATGGGGGA TTAATTGGGC TACAACCCTA TCCCCAGGCG TATCCTTCAC TGGACTAATA CTTTACGATA TCTTGGTTAA GCACCTACAC CTTCACTTAA CCCTACTATC AATAGCCGTC TACACACCGG GTATAGTGAA TGCCTTATCC GTCTTATCCA TGTATTACCT GGGTTCAAGG TTCGGAGGCA GGTACGTGGG TCTTTTAACC GCATTAATGA CTGCCTTCTC CCTAATATTC CTACAGAGGG GTGAGGCCAG TTGGTACGCT GATGCAACCC TGTTTCAATT CATAGCACCA CTGGGCATGG CTCTATTCAT TGAGGCACTT AGGCAGAGGA ATTGGATACC CTACGCGGTC TTAGCCGCTG TGGTGAATGG TTCACTAGTA TGGTTCTGGG GTTCATTCAC CTTCGTGTTG AACGCATATG GTGCATACGC CATACTACTC TCCATATATG TGCTTTACAG GCTTTATAGA GGTAGGGTTA TTCCACTCCG CATTACTGAC GGTATCTCAG TTGACCCAGT GAATGCACTA GGCACCTACA CGTTAACTTA CCTTGGCTTC GCAGCCTTCC TAGCCATGAC GCCGAGGTAT AAGTTGCATG CAGTACTTAG TCTTGGTGCA TTAGGTACTT TAGCGGCTTT ACTGGCTGTT GTGGCGATTA TAGTTGTTCT GCTGGAGAGG TTTGGTGCAC GTAAACTAGT TACCGCATCC AAGTACATTA TAGCTGCCGC AGTGGTGTTC CTTGTGATTA TTCTTGCCTT AGCCCTATCC GGTGTTTCAG TCCTCATACA TATACCTGGT GGTAAGTACT TGGCTGCCTT ATTCCCAACA GCCCGCAGTG CCTTGGTTCA AAGCGTCGCT GAGCATTCCC CATCAACGGC TCATCAATTA CTCTCAACAA CAGGTTATAC CCTTCCCTTC GAGATTGCTG GCTTAACGTA CGCCTTATCC ACGGTTGACG TGGCTGGCTT ACTGTTATCC ATTACGTCAG TCTTATCAGT ATACTTCGCC TCCAGTGAGG CTTGGTTAAC AATGCTCATG TTTGCCTGGC TCCCCGTGGC CGCCTACGGC CTCTACCTGG TAATTAGGTT CGTGGCTAGA CGTGGTATTG ATGTTATTGG GCTACTGACC GTGGCCGTTG TGACTGCGTT ATTCGCAATA TCGGTTGTAG TTATTGCTCA ATCAGGTGTA CCTATTGCTG CTGCGCCTCA GCAGATTGTC TCAACCACTG AGCCTGCAAT ACCATCCAGT GACTGGCTTG ATGCACTCTA CTGGATTCAA TACAATACTC CTCATAATTC AGTCCTAGCC TCCTGGTGGG ATTACGGTTA CTGGTTGGCG ATAATGGGTA ATAGGACTAG CTTGGCCGAT AACTCAACGG TTAATGGTAC TCAGATTAAG CTCATAGCCA CCGCCTTCAC GTCAACTAAT GTAACCGAAT CCCTTAAGTT ACTGCGTAGT GTTGGTGCTG ATTACGTTGT TGTCTTCCTA CCATACTACC CATTCCCCAT AACCGTCCCC TCACCCATGT CAGCGTTAAG CGTTGGCTCA TCATCCCAAA GCATGTTAGC CCTCTGCGCC CTCTACCCAG AGTACCCTAC TGGTGGTGAT TTCGTTAAGA GCTACTGGAT GAGCACAATA TCCGGTAATT CACCAGAATA CACCAACACC CACATACTCA GTGCCGCTGA GATAATCAGT AGTACACCCA GTGGTGGAAC AGCTACATAT AACCTGTACG TACCCTTAAC CAACACCACG CTTTACCGTC TCCTCTTTGA CTTAGAGGCC CCAGCATACT CAATTACCGT TGACCAGTGC TTGACTCAGA TAAGGACAAC CACGTCGGCG ACACCATTAA CACTACCCCT GTGGTTATTC AATACTTGGC CAACCTACTC TCAGTCATCA TCCTCATCCT CTGCAGTTCA CCTAGTATTG ACATTCCAGC CGATACTAGG TCAAAGCCTA GTACCGCCTC CGTTTGTTGG CACTAACACT ACTCTGTTGA ATCAGCTTTA CTTCACATGG TTCTACGGTA ATTGGTTAAT TTCACCGCCA GGCTTCCAGT TGGTTTACGT TTCAAGGCCA TATGGATGGG TATTGGTGTA TAAGATCAAT TACTCAGTGC TTAAAAGCTA A
|
Protein sequence | MVKAGGGKRG SAAKAPTKTR VSLTDAELRE LRSTQWFGLL AALAAAFTAG LYIRLYPAFL WGNYINEFDP YIRYYLTEFM LKMGVVKGIE WWLSGGLING NLYINTHFWY PWGINWATTL SPGVSFTGLI LYDILVKHLH LHLTLLSIAV YTPGIVNALS VLSMYYLGSR FGGRYVGLLT ALMTAFSLIF LQRGEASWYA DATLFQFIAP LGMALFIEAL RQRNWIPYAV LAAVVNGSLV WFWGSFTFVL NAYGAYAILL SIYVLYRLYR GRVIPLRITD GISVDPVNAL GTYTLTYLGF AAFLAMTPRY KLHAVLSLGA LGTLAALLAV VAIIVVLLER FGARKLVTAS KYIIAAAVVF LVIILALALS GVSVLIHIPG GKYLAALFPT ARSALVQSVA EHSPSTAHQL LSTTGYTLPF EIAGLTYALS TVDVAGLLLS ITSVLSVYFA SSEAWLTMLM FAWLPVAAYG LYLVIRFVAR RGIDVIGLLT VAVVTALFAI SVVVIAQSGV PIAAAPQQIV STTEPAIPSS DWLDALYWIQ YNTPHNSVLA SWWDYGYWLA IMGNRTSLAD NSTVNGTQIK LIATAFTSTN VTESLKLLRS VGADYVVVFL PYYPFPITVP SPMSALSVGS SSQSMLALCA LYPEYPTGGD FVKSYWMSTI SGNSPEYTNT HILSAAEIIS STPSGGTATY NLYVPLTNTT LYRLLFDLEA PAYSITVDQC LTQIRTTTSA TPLTLPLWLF NTWPTYSQSS SSSSAVHLVL TFQPILGQSL VPPPFVGTNT TLLNQLYFTW FYGNWLISPP GFQLVYVSRP YGWVLVYKIN YSVLKS
|
| |