Gene Cmaq_0380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0380 
Symbol 
ID5708579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp414360 
End bp415181 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content46% 
IMG OID641274883 
ProductAAA ATPase 
Protein accessionYP_001540216 
Protein GI159040964 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0979231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.600608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAGTA GGCTACTGGC CACACCGGAG AGGGCTAATA TACTACTTGG GCCCTCCTGG 
AGGACTGTGA AGGAGAAAGT AATGGGCATG ATTAATGATT ACCAGTTAAT GGCCCTAGTG
GGTAGGGCTG GGTCGGGTAA GACTCACATG GCCTTGAACA TATGCAGTGA ACTTAGGAGG
GAGTGGTTAT GCATGTACCT TGATGCCGCC CAGTTAACCG ATAAGAGACT TGGTCAGTTA
CTGGGTGTGG CGGTTAAGAA TAATGAGGAC TTCATTAAGG GAGTTATGAG GCTGGCTAAG
TCAAAGAGGC TTAATGGCAC TTTGTCCAGG TTCATTAAGC TAAGCATCAA TGACCTCATA
TCAGCATCCC TAAACTACCC GGTGGACTTC CTAACAATGC TACATGACCT AACCCTAGCC
GTTGGTTTAA AGGGCCTGGT GCTGGTTATT GATGAAGGTG CGTTAAGCCA GGATGACCAA
TCAATAGGAG GATTCATAAC CGCGGTGCAT ACCTTGAGGA ACACTATGCC TAGGTTAAGT
GGATTAAGGG TTATTTTAAC CATGCTCCCC GATGTGGTTG ATTACATTGC TAAAAACGAC
CCACCACTCT TCGAGATACT AAACATGGGT GTAGTCAATA TGCCTGACTA CGTAACTGAG
GAGGATTTAA TGGAGGTAGC TGATGCATAT GATCTGAACG GTGAATTACT TGAATTAATT
AAAGCAAGTA ACCTATCAAT GAGGCAAGTA ATATGCGTCG CCGAGTTAAA GGACCTTCAG
AGGTGTGGGC TTCAGGGTGA GGTTGAGGTA ACCATAACTT AA
 
Protein sequence
MQSRLLATPE RANILLGPSW RTVKEKVMGM INDYQLMALV GRAGSGKTHM ALNICSELRR 
EWLCMYLDAA QLTDKRLGQL LGVAVKNNED FIKGVMRLAK SKRLNGTLSR FIKLSINDLI
SASLNYPVDF LTMLHDLTLA VGLKGLVLVI DEGALSQDDQ SIGGFITAVH TLRNTMPRLS
GLRVILTMLP DVVDYIAKND PPLFEILNMG VVNMPDYVTE EDLMEVADAY DLNGELLELI
KASNLSMRQV ICVAELKDLQ RCGLQGEVEV TIT