| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0316 |
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| Symbol | rpl4lp |
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| ID | 5710161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 353183 |
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| End bp | 354019 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641274820 |
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| Product | 50S ribosomal protein L4P |
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| Protein accession | YP_001540154 |
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| Protein GI | 159040902 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | [TIGR03672] 50S ribosomal protein L4P |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTATTG ACTTATCTCC ATTACTTAAG AATAAGTATG AGGTTCCAGC TAAGGCTAAG
TTACTGAACC TTAACGGTGA GGCGGTTGGT GAGGTTGACT TACCTGAGCA TTTCAAGACA
CCGATAAGAC TGGACTTAAT TAGGAGGGCT GTCTTAAGTG CATTAACTGC TAGGCTTCAA
CCAAAGGGTA CTGATAAGGA GGCTGGGTTA AGGACGTCTG CGGTAAGCTT CGGTACTGGC
TTAGGTATAG CCAGGGTTCC TAGGATTAAG GGTAACATGT GGCCGAGGGC TAGGATTGCG
CCAAATGTGG TTAAGGGAAG GAGGGCTCAC CCACCTAAAG TTGAGAAGAG GCTGTGGGAG
AGGATTAATA GGAAGGAGAG GCTTCTGGCA ATTAGGTCAG CCATAGCGGC CACCGCGGTT
AGGGAGCTTA TAATGGCGAG AGGACACTTG GTGGGGGATG TTAAGGCAAT ACCGCTCGTA
GTGGTTAATG AATTTGAGGG AATCAGTAAG GCTGCTGACG TTAAGAATGT GTTTAAGGCC
CTTGGAGTAT GGAGTGATGT AGTTAAGGCC CAGGGTAATG TAAGGATTAG GGCTGGGAGG
GGTAAGATGA GGGGTAGGAG GTATAAGGAG CCTAAGAGCA TTCTTGTGGT TGTTTCAAGG
AAGGATGCAC CAGTAATTAG GGCTGTTAGG AACATGGCTG GAGTCGACGT CGTCTACGTT
GATAACCTAA GCATACTACA CTTAGCGCCA GGGGGTGTGC CAGGTAGGTT AACATTATGG
ACCCAGGGGG CTATTGAAAG ATTAAGTAAT GAAAAGCTCT TCACAGTGGG TGAGTGA
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| Protein sequence | MSIDLSPLLK NKYEVPAKAK LLNLNGEAVG EVDLPEHFKT PIRLDLIRRA VLSALTARLQ
PKGTDKEAGL RTSAVSFGTG LGIARVPRIK GNMWPRARIA PNVVKGRRAH PPKVEKRLWE
RINRKERLLA IRSAIAATAV RELIMARGHL VGDVKAIPLV VVNEFEGISK AADVKNVFKA
LGVWSDVVKA QGNVRIRAGR GKMRGRRYKE PKSILVVVSR KDAPVIRAVR NMAGVDVVYV
DNLSILHLAP GGVPGRLTLW TQGAIERLSN EKLFTVGE
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