| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0296 |
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| Symbol | |
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| ID | 5710320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 334003 |
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| End bp | 335352 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641274800 |
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| Product | GTP-binding signal recognition particle |
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| Protein accession | YP_001540134 |
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| Protein GI | 159040882 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000583511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0555503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGACT TAATGGACGC CATAGGCAGC ATAATAAGTA GGATCAGGGG CTCAACCTTA
ATTGATGAGG AAACCCTAAG GAGCATACTT AGGGATCTGC AGAGGGCATT AATAAGGGCT
GACGTCGACG TTAAGCTGGT TTACGAATTA ACCAAGAGCA TTGAGGAGGA GTTTAAGGAG
GCTAAGGAAC TCCCCCCAGG CTTAACAGCT AAGGACTATT TGGTTTACTT ACTTTACAGG
AAACTCACCG ACCTACTTGG TGGTGATAAG GAGCCTGACG TTGAGGTTAA GACCAAGCCC
TACATACTAA TGCTGGTGGG TACTGAGGGT AGTGGTAAAA CAACCACGGC AGGTAAGTTA
GCTAACTTCT ACATTAAGAG GGGGCTTAAG GTTGGTTTAA TTGAGACTGA CACCATTAGG
CCTGGGGCCT TTGACCAGTT GAGGCAATTA GCTGAGAGGG TTAAGGCAAT GTTCTTCGGT
GACCCAAGCC TAGGCAACGC CGTTAACATA GCTAAGGCTG GTTTAAGTAG AATGATTAGC
AGTAAGGCTG ATTTAATAAT AATAGATACT GCTGGTAGGC ATAGGAATGA GGAGGAGCTC
CTCAGTGAGG TTAAGGAGAT TTACGAGGCC GTGAAGCCCA ATGAAGTAAT GCTTGTTGTT
GATGCAACCA ATGGTAAGCA GGTTGGGGCT CAGGCAGAGG CCTTCAGTAA GTATGTTCCA
GTTAACTCAA TATTCATAAC TAAACTCGAC AGTACGGCTA AGGGGGGTGG GGCCCTTGTA
TCCGCGGTTA AGACTGGGGC TAGAATTAAG TTCATTGGTA ATGGTGAGGA TATTGAGGAT
ATTGAGGTCT TTAACCCAAG GAGGTTTGTG GCTAGGTTAA TGGGCATGGG TGATGTTGAG
TCACTCCTGG ATAAGGTTAA GGCAATGGAG GAGGAGGAAG AGGTTCTTGA GGATATTGAA
ACCGGTAAGT TCACCTTATT AACATTAATG AAGCAGCTTG AAGCCATGGG TAAACTCGGC
CCATTAAGTA GGATTCTTCA AATGCTCCCC ATGGGGTTAA TGCCTCAGTT AAAGGAATTG
AATGATGATC AACTAATGAA CGCCCAGGAC AGGATGAGGA AGTGGTTATC AATATTGAGA
TCAATGACTA AGGAGGAGTT ACTTAACCCA AATATATTAA ACGCATCAAG GATTAGGAGA
ATAGCCAAGG GCTCAGGGGT GACGCCGAGG GATGTTAGGG AATTACTGAG GTACTATAAT
GAGATGAGTA GAATGATGAG TAGCCTTAAG AAGAGTCAAC GCAGGTTGGG AAGCCTATTC
AGGAGATTCA GCATTAATCA GGGTCAGTAA
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| Protein sequence | MRDLMDAIGS IISRIRGSTL IDEETLRSIL RDLQRALIRA DVDVKLVYEL TKSIEEEFKE
AKELPPGLTA KDYLVYLLYR KLTDLLGGDK EPDVEVKTKP YILMLVGTEG SGKTTTAGKL
ANFYIKRGLK VGLIETDTIR PGAFDQLRQL AERVKAMFFG DPSLGNAVNI AKAGLSRMIS
SKADLIIIDT AGRHRNEEEL LSEVKEIYEA VKPNEVMLVV DATNGKQVGA QAEAFSKYVP
VNSIFITKLD STAKGGGALV SAVKTGARIK FIGNGEDIED IEVFNPRRFV ARLMGMGDVE
SLLDKVKAME EEEEVLEDIE TGKFTLLTLM KQLEAMGKLG PLSRILQMLP MGLMPQLKEL
NDDQLMNAQD RMRKWLSILR SMTKEELLNP NILNASRIRR IAKGSGVTPR DVRELLRYYN
EMSRMMSSLK KSQRRLGSLF RRFSINQGQ
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