Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0265 |
Symbol | |
ID | 5708770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 303225 |
End bp | 304394 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641274768 |
Product | hypothetical protein |
Protein accession | YP_001540103 |
Protein GI | 159040851 |
COG category | [S] Function unknown |
COG ID | [COG1415] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.499335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0000000041207 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGGGGTTAA CGGGATTTGC CGACTTACCA CTGCATGAGG GGCATGTTCC ACCCTGGTTA TTCAGCAGAA TGATTAAGTT AACCTCATTG ATAATTAGGT TAATGCACGA TGAGTACGGT GTTAAGGGTA CAATAAGGCT CTTCAGTAAT CCAATCTTCT TCCAATCCTT CAATAACATA ATAGGAATGG ACTGGGACTC CTCGGGAAGC ACCACCGTGA CCACCGCTGC GCTTAAGGAG GCGTTGGGGT CATTGGACAT TGGAATCAAG GTGGTTGGGG GTAAGGGGGA GTATGCGTTG AGGGTTCCAG ATGAGTTAAG GGAATTGGAG AAGGTCTTCA ACATTAATTC AGAGGAGTTG ATAACTGTAT CAAGGTTAGT GGCTAAGGTG GATAATGTCG CCCTCCAGGA TGGGCATAGG CTATACCATC ACTCAATGAT TGTTGGGGAG GATGGGACGT GGGCTGTTAT TCAACAGGGC CTTAACCCTG AAACCAAGTA CGCTAGGAGG TATCATTGGT GGATGGAGAC TAGTTTCATT AATAACCCCC ATGAGGGAAT CGTGGGGGTT AAGGGCAACT ACGCGTTAAA CACCGTCAGC AGCACCAGTG AGGAGGCGCG TTCAGCGATT ATTGATATTG TTAATCAGGA CCCAGTTAAG GTGAGTAGGG ATTTAGCTAG GGTGAAGTCC ATGATGAGGG GTTATGGGAA TAAGTCAATC CTAAGCTACA TAAATGACAC TAATGATGAG TCACCATCCT ACTATAACCC TAGGCTCAAC ATTATTGTGA ACAGGGGGTT AAGCATAAGT GAAGAGGCGT TGAGAAATGC CAGGGGTGTT GACTCATTCA AGAACCTACT GTTAATTAGG GGTATAGGGC CTAGTACCAT GCTTGCCCTA GCCCTAATAG CGCAATTAAT TTACGAAGCA CCAGTGGATT GGACTGACCC GGTTAACCTC GACCCTAGGA GGTTTGCATT CGCCTTGGGT GGTAAGGATG GTTCACCATA CCCAGTGAGT AAGGAAGTAT ACGATACGGT TCTTGATCTT TTAAATAGAA TAGTAGATAA CATTAATAGG GATGGTGGTT TAAAACCATA TTTAAGGCAT ATTGCCAAGG TTGCTAAGAA ACTTAACCTA CCTATTGATT TAGTTAAACC AACTTATTAA
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Protein sequence | MGLTGFADLP LHEGHVPPWL FSRMIKLTSL IIRLMHDEYG VKGTIRLFSN PIFFQSFNNI IGMDWDSSGS TTVTTAALKE ALGSLDIGIK VVGGKGEYAL RVPDELRELE KVFNINSEEL ITVSRLVAKV DNVALQDGHR LYHHSMIVGE DGTWAVIQQG LNPETKYARR YHWWMETSFI NNPHEGIVGV KGNYALNTVS STSEEARSAI IDIVNQDPVK VSRDLARVKS MMRGYGNKSI LSYINDTNDE SPSYYNPRLN IIVNRGLSIS EEALRNARGV DSFKNLLLIR GIGPSTMLAL ALIAQLIYEA PVDWTDPVNL DPRRFAFALG GKDGSPYPVS KEVYDTVLDL LNRIVDNINR DGGLKPYLRH IAKVAKKLNL PIDLVKPTY
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