Gene Cmaq_0139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0139 
Symbol 
ID5709996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp164827 
End bp166056 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content42% 
IMG OID641274642 
ProductGTP-binding protein HSR1-related 
Protein accessionYP_001539979 
Protein GI159040727 
COG category[R] General function prediction only 
COG ID[COG2262] GTPases 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR03156] GTP-binding protein HflX 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAGG AGGCATTACT GGTTTACGTT GATCCAAATC CCATGGAGAG TAAGGTTAAT 
GAATTCAGAA TGCTTGCCGA GGTAGCTGGC TATGAGGTTA AGGGGCTTGT AGTTCAGAGG
AGGATCCCGG ACTCCAGGTA TTACGTGGGT ATTGGTAAGC TTATGGATGT TAAGAGGCTT
ATTGAGGACG GCGTCAATTA CCTAATAACA TACCATCAGC TTAAGCCTAA TCAATCCTTT
AACTTATCCA GGGAGTTAAG GGTGAATGTA ATGGATAGAG TTAAGTTAAT CCTTGAGATA
TTTGATAAGA GGGCTGGTGA TGCTGAGGCT AAACTACAGA TAAAGTTAGC TGAGTTAAAG
TACTCACTGC CCTTAATCAG GGAGTACATT AGGTTGAGTA AGAAGGGGGA GCAGATTGGC
TTTCACGGCC TGGGTGAGTA TGGTGCAGAA ACATACTATA AGCATGCCTT AAGGCAGATA
GCCTCAGTTA AGAGGAGGTT AAACGCAATA AAGTCCATGA GGGATACTCA CATAATTAAG
AGGAAGGATA AGGGTATCCC TGAGGTTGCG TTAACAGGCT ACACAATGGC CGGTAAGACG
ACGCTCTTCA ATAGGTTAAC CGGCGAGGGC AAGTATATTG ATGGTAAGGC ATTCGCAACC
CTATCAACCT ACTCCAGGTT AGTTAATTTT AATGGTAAGT ACGCCGTTAT TACAGATACC
GTAGGCTTCA TTGATGACTT ACCACCAGTA TTAGTGGAGT CTTTCTACTC AACAATAAGG
GAAATAGCGT ACGCAGACCT CATACTCCTC ATAATAGACT CAAGTGACTC AGCGGAGGAG
GTGCGTAGGA AGGTTAGCAG TTCAATAAGT ATATTAAATG ATATAGCTGT ACCTATGAGT
AAGGTTATTC CAGTCTTCAA TAAGATTGAT GAAGTTAAGG ACACTGATTC ATTACTTAAT
GTTGCGCTTG AATTCAAGTT AAGTAACCCA TTATTCATAT CAGCTAAGGC TGGTATTGGG
TTGGAGTCAT TGAAGAGTAG GATAGCCTCC GAGTTAAGGG ATTACACCAC GGTGAGATTA
GCCGTGGGGG ATCTTGATAC TGTTAATCAA CTGCTTAGGC ATAGGGCATC AATAATGTTT
ATTAATAATG ACTCCGCATT AGTTAATGTT AGGAGGGAGG ATCTTGCACT CCTTGATGAG
AAGGGGATTA GTTACCGGAT TGAAGGCTGA
 
Protein sequence
MGKEALLVYV DPNPMESKVN EFRMLAEVAG YEVKGLVVQR RIPDSRYYVG IGKLMDVKRL 
IEDGVNYLIT YHQLKPNQSF NLSRELRVNV MDRVKLILEI FDKRAGDAEA KLQIKLAELK
YSLPLIREYI RLSKKGEQIG FHGLGEYGAE TYYKHALRQI ASVKRRLNAI KSMRDTHIIK
RKDKGIPEVA LTGYTMAGKT TLFNRLTGEG KYIDGKAFAT LSTYSRLVNF NGKYAVITDT
VGFIDDLPPV LVESFYSTIR EIAYADLILL IIDSSDSAEE VRRKVSSSIS ILNDIAVPMS
KVIPVFNKID EVKDTDSLLN VALEFKLSNP LFISAKAGIG LESLKSRIAS ELRDYTTVRL
AVGDLDTVNQ LLRHRASIMF INNDSALVNV RREDLALLDE KGISYRIEG