Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0139 |
Symbol | |
ID | 5709996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 164827 |
End bp | 166056 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641274642 |
Product | GTP-binding protein HSR1-related |
Protein accession | YP_001539979 |
Protein GI | 159040727 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAAGG AGGCATTACT GGTTTACGTT GATCCAAATC CCATGGAGAG TAAGGTTAAT GAATTCAGAA TGCTTGCCGA GGTAGCTGGC TATGAGGTTA AGGGGCTTGT AGTTCAGAGG AGGATCCCGG ACTCCAGGTA TTACGTGGGT ATTGGTAAGC TTATGGATGT TAAGAGGCTT ATTGAGGACG GCGTCAATTA CCTAATAACA TACCATCAGC TTAAGCCTAA TCAATCCTTT AACTTATCCA GGGAGTTAAG GGTGAATGTA ATGGATAGAG TTAAGTTAAT CCTTGAGATA TTTGATAAGA GGGCTGGTGA TGCTGAGGCT AAACTACAGA TAAAGTTAGC TGAGTTAAAG TACTCACTGC CCTTAATCAG GGAGTACATT AGGTTGAGTA AGAAGGGGGA GCAGATTGGC TTTCACGGCC TGGGTGAGTA TGGTGCAGAA ACATACTATA AGCATGCCTT AAGGCAGATA GCCTCAGTTA AGAGGAGGTT AAACGCAATA AAGTCCATGA GGGATACTCA CATAATTAAG AGGAAGGATA AGGGTATCCC TGAGGTTGCG TTAACAGGCT ACACAATGGC CGGTAAGACG ACGCTCTTCA ATAGGTTAAC CGGCGAGGGC AAGTATATTG ATGGTAAGGC ATTCGCAACC CTATCAACCT ACTCCAGGTT AGTTAATTTT AATGGTAAGT ACGCCGTTAT TACAGATACC GTAGGCTTCA TTGATGACTT ACCACCAGTA TTAGTGGAGT CTTTCTACTC AACAATAAGG GAAATAGCGT ACGCAGACCT CATACTCCTC ATAATAGACT CAAGTGACTC AGCGGAGGAG GTGCGTAGGA AGGTTAGCAG TTCAATAAGT ATATTAAATG ATATAGCTGT ACCTATGAGT AAGGTTATTC CAGTCTTCAA TAAGATTGAT GAAGTTAAGG ACACTGATTC ATTACTTAAT GTTGCGCTTG AATTCAAGTT AAGTAACCCA TTATTCATAT CAGCTAAGGC TGGTATTGGG TTGGAGTCAT TGAAGAGTAG GATAGCCTCC GAGTTAAGGG ATTACACCAC GGTGAGATTA GCCGTGGGGG ATCTTGATAC TGTTAATCAA CTGCTTAGGC ATAGGGCATC AATAATGTTT ATTAATAATG ACTCCGCATT AGTTAATGTT AGGAGGGAGG ATCTTGCACT CCTTGATGAG AAGGGGATTA GTTACCGGAT TGAAGGCTGA
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Protein sequence | MGKEALLVYV DPNPMESKVN EFRMLAEVAG YEVKGLVVQR RIPDSRYYVG IGKLMDVKRL IEDGVNYLIT YHQLKPNQSF NLSRELRVNV MDRVKLILEI FDKRAGDAEA KLQIKLAELK YSLPLIREYI RLSKKGEQIG FHGLGEYGAE TYYKHALRQI ASVKRRLNAI KSMRDTHIIK RKDKGIPEVA LTGYTMAGKT TLFNRLTGEG KYIDGKAFAT LSTYSRLVNF NGKYAVITDT VGFIDDLPPV LVESFYSTIR EIAYADLILL IIDSSDSAEE VRRKVSSSIS ILNDIAVPMS KVIPVFNKID EVKDTDSLLN VALEFKLSNP LFISAKAGIG LESLKSRIAS ELRDYTTVRL AVGDLDTVNQ LLRHRASIMF INNDSALVNV RREDLALLDE KGISYRIEG
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