| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0113 |
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| Symbol | |
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| ID | 5708886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 138035 |
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| End bp | 139276 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641274619 |
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| Product | diaminopimelate aminotransferase |
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| Protein accession | YP_001539957 |
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| Protein GI | 159040705 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.239854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGG ATAAGCCTGA TTTAAGTAGG GTAATGAGTA AGGTGGGTGA ATTAAGGGAA
TTCATTATTA ACCTATACAA GGACTTCATA CCGATAAGGG CACTTGCCCC TGAGAATGGG
GGCGATGGGG AGTGGGATAG GGCCCAGTAC TTAATTAATG TTGCCAGGCA GTATTTTGAT
GATGTTAAGG TTATTGAGGC ACCTGACCCT AGGGTGAGTA GGGGTTCAAG ACCTAACGTG
GTGGCTACCA TTAAGGGGAT TGATGAATCT AGGACCTTCT GGGTAATAGC GCATATGGAT
ACTGTACCAG AGGGTGATAG AGCCCTGTGG AGTGTTGAGC CTTATCAAGC GACTGTTAAG
GGGGATTTAG TGTATGGTAG GGGTGTTGAG GATAATGGTC AAGGCATAGT AATGGGCTTA
GCCGTGGGTA AGGTTTTAAG GGATTTAGGC ATTAAACCAC CATTCAACTA TGGCCTAATA
CTGGCCAGTG ATGAGGAGGT GGGGAGTAAG TATGGGATAA GGTACATACT GGATACTGAG
AGGGATTTAT TTAAGGCCAG TGACCTTATC CTCGTACCTG ATGCAGGGAA TCCCGATGGA
TCAATGATTG AGATAGCTGA GAAGGCAATA CTTTGGTTAA GGATTACTAT TACTGGTAAG
CAGGGCCATG CCAGTGTCCC TGAGTCGGCC TTGAATGCCC ATAGGTTAGG CATGATGCTT
GCCCTTAAGC TTGATGAAGT GCTTCACAGT ACCTATAATG CCGAGGACCC ATTATTCACG
CCACCTGAGT CAACCTTTGA ACCCACTAGG GTTGATAAGA ATGTGGATAA CGTTAACACT
ATACCCGGTA GACACGTGTT CTACTTCGAC TGCAGGGTGT TACCTAGGTA TAGTCTTGAT
GATGTCTTAG CCACGGTCAA TAAGACTGCT GAGGAATTCT GCAGGGAGAA AGGCTGCGGA
TTCAGTGTTG AGGTTTTGAA TAGGGATGAC CCAGCACCCC CCACTAGTCC TAATAGTGAA
GTTGTTCAGA GGCTTACTAG GGCTATTAAG ATGATTAGGA ACATTGATGT TAAGTACATG
GGTATTGGGG GAGGCACGTA TGCTAAGTAC ATTAGGATGC TGGGTATTCC TGTGGCAGTC
TGGATGACTT CAAGTAATAC TGCGCATTCC CCCGATGAGC GCGTTAACTT AAACGACGTC
ATAAATGATG TTAAGGTTAC TTTAGCATCA ATGATGATTT AA
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| Protein sequence | MTQDKPDLSR VMSKVGELRE FIINLYKDFI PIRALAPENG GDGEWDRAQY LINVARQYFD
DVKVIEAPDP RVSRGSRPNV VATIKGIDES RTFWVIAHMD TVPEGDRALW SVEPYQATVK
GDLVYGRGVE DNGQGIVMGL AVGKVLRDLG IKPPFNYGLI LASDEEVGSK YGIRYILDTE
RDLFKASDLI LVPDAGNPDG SMIEIAEKAI LWLRITITGK QGHASVPESA LNAHRLGMML
ALKLDEVLHS TYNAEDPLFT PPESTFEPTR VDKNVDNVNT IPGRHVFYFD CRVLPRYSLD
DVLATVNKTA EEFCREKGCG FSVEVLNRDD PAPPTSPNSE VVQRLTRAIK MIRNIDVKYM
GIGGGTYAKY IRMLGIPVAV WMTSSNTAHS PDERVNLNDV INDVKVTLAS MMI
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