Gene Cmaq_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0111 
Symbol 
ID5709050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp136590 
End bp137372 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content41% 
IMG OID641274617 
Productregulatory protein ArsR 
Protein accessionYP_001539955 
Protein GI159040703 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0376512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTTCTG CATTAAGGGA TTATGACCTC CGGCGAGCGG TTTATAACCC CCTTCTTCAA 
TTAGGCTTAA TAGTGAATAC AGTGCCGGAT AACCCATTGA AGGATAATGA ACCCATTAAC
ACCCTATTAC TGTTGCCTGT CAAGGCTTTT GAAGCATTAA CCACATACCC GGTGAGACTG
AGTATTGTGA ATGCCTTGAT AAATGGGCCA TTAACAGTTA CTGATGTTTC AAGCAGGTTA
AAGTTAGCTA AGGGTATTGT GCATAGGCAT TTGAAGGTTC TTGAGAAGCT TGGTTGGGTT
ACTGTGGCTA ATGATGAGGT CCTCAGGATA CTTAACCTAC CTAGGGAGGC TAATAGAGTG
TACTACATGT TATCCTCATT AATATACTTC GGTTATAGTG TTGTTGTTAA TAATTATGAG
GTTCAACTTA AGATTGATGG TAAATACGCA GCCTTCATAG ACTCAAGGAA GGGGATTCTC
ATTGTTAAAA CCCCCACCGC CACCTATGGT TGCGTTAAGT CCTGTGGAAA CAGCGGCGAA
TGCTTTAATT GGGCTCTTAG GGTTTCAAGG AAGTTTAAGG TTCAGATTGA GGCACCGAGC
AGTAGTGTTG ATGAGACCTT GGTTCAATTA TTCCACGGAA TATTGATTAA AGGCTTCACG
TCACCTAAGG CTAAGTTACC TTTAATAAAA ATAATTGACT TGAAGATTGA CAACATGTAT
AGGCAATGGT TAGGTAACCC AATTAGGGTT AATAACGTTA ATCACAGGAA CGGTGGGCAG
TAA
 
Protein sequence
MVSALRDYDL RRAVYNPLLQ LGLIVNTVPD NPLKDNEPIN TLLLLPVKAF EALTTYPVRL 
SIVNALINGP LTVTDVSSRL KLAKGIVHRH LKVLEKLGWV TVANDEVLRI LNLPREANRV
YYMLSSLIYF GYSVVVNNYE VQLKIDGKYA AFIDSRKGIL IVKTPTATYG CVKSCGNSGE
CFNWALRVSR KFKVQIEAPS SSVDETLVQL FHGILIKGFT SPKAKLPLIK IIDLKIDNMY
RQWLGNPIRV NNVNHRNGGQ