Gene Cmaq_0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0082 
Symbol 
ID5708988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp96791 
End bp97513 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content37% 
IMG OID641274585 
Producthypothetical protein 
Protein accessionYP_001539926 
Protein GI159040674 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.14198 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATGA ACAGTAGTAG CGTAATCATG ATTAGGAACG CCATATTAAT TTACCTACTT 
GGCTCAATAC TACTGGTGAT TGTCTTCATG TTGTATATAG CTGGTTACGT CATTAATCAA
TCTCAATCAT ACTACATTAA CCTAGAGAAA CCGTTTTATG TGATAATAAC CCTTAATTCA
CTATTAGCCG TAGCAGTGGC TGTATTAGAG TATACTGGGT TCAGGAGATT ATCTGAATTA
AAGGGAACCT ATAGGTTTGG TGCATATGGT GCAATACTTC AATTAATCTC ATTACCATTC
TCCATAACCG GAGCCATATA TTACATTCAA AGCATTGAGA ACACGTATAA GGTTAGTAAT
ATATCAGGGT TCACAATGCA GGCGTTACTT GTTAAGGTTA ATTCATTAAC ATACCTAGGT
ACCGCTGGTT CATTAATTAA CCTAATTGGC TGGCTGCTGG TTTTCGCAAT ACTTCATAAA
TTAGGTTCTG ACCACGGAAA CGGCATCGTG AAGACTGGTT CATTAGCAGC CATAATTGGA
CTGGCACTGG CAATTAGTGT GACTTCATAT GTACCTGTGG CTTATACTTC ATATAATGCC
ATTAATGTTG CATCCGTACT AATATTATTC ACGTTACTCA TTATAGGGGG CTTAATAGCA
TTCATTGGTA TAATAATGCT CCTAATTGGC TTAACATCAC TAGCAAAGGT TATTACGCAT
TAA
 
Protein sequence
MRMNSSSVIM IRNAILIYLL GSILLVIVFM LYIAGYVINQ SQSYYINLEK PFYVIITLNS 
LLAVAVAVLE YTGFRRLSEL KGTYRFGAYG AILQLISLPF SITGAIYYIQ SIENTYKVSN
ISGFTMQALL VKVNSLTYLG TAGSLINLIG WLLVFAILHK LGSDHGNGIV KTGSLAAIIG
LALAISVTSY VPVAYTSYNA INVASVLILF TLLIIGGLIA FIGIIMLLIG LTSLAKVITH