Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0082 |
Symbol | |
ID | 5708988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 96791 |
End bp | 97513 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641274585 |
Product | hypothetical protein |
Protein accession | YP_001539926 |
Protein GI | 159040674 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.14198 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGATGA ACAGTAGTAG CGTAATCATG ATTAGGAACG CCATATTAAT TTACCTACTT GGCTCAATAC TACTGGTGAT TGTCTTCATG TTGTATATAG CTGGTTACGT CATTAATCAA TCTCAATCAT ACTACATTAA CCTAGAGAAA CCGTTTTATG TGATAATAAC CCTTAATTCA CTATTAGCCG TAGCAGTGGC TGTATTAGAG TATACTGGGT TCAGGAGATT ATCTGAATTA AAGGGAACCT ATAGGTTTGG TGCATATGGT GCAATACTTC AATTAATCTC ATTACCATTC TCCATAACCG GAGCCATATA TTACATTCAA AGCATTGAGA ACACGTATAA GGTTAGTAAT ATATCAGGGT TCACAATGCA GGCGTTACTT GTTAAGGTTA ATTCATTAAC ATACCTAGGT ACCGCTGGTT CATTAATTAA CCTAATTGGC TGGCTGCTGG TTTTCGCAAT ACTTCATAAA TTAGGTTCTG ACCACGGAAA CGGCATCGTG AAGACTGGTT CATTAGCAGC CATAATTGGA CTGGCACTGG CAATTAGTGT GACTTCATAT GTACCTGTGG CTTATACTTC ATATAATGCC ATTAATGTTG CATCCGTACT AATATTATTC ACGTTACTCA TTATAGGGGG CTTAATAGCA TTCATTGGTA TAATAATGCT CCTAATTGGC TTAACATCAC TAGCAAAGGT TATTACGCAT TAA
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Protein sequence | MRMNSSSVIM IRNAILIYLL GSILLVIVFM LYIAGYVINQ SQSYYINLEK PFYVIITLNS LLAVAVAVLE YTGFRRLSEL KGTYRFGAYG AILQLISLPF SITGAIYYIQ SIENTYKVSN ISGFTMQALL VKVNSLTYLG TAGSLINLIG WLLVFAILHK LGSDHGNGIV KTGSLAAIIG LALAISVTSY VPVAYTSYNA INVASVLILF TLLIIGGLIA FIGIIMLLIG LTSLAKVITH
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