Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0076 |
Symbol | |
ID | 5710440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 90266 |
End bp | 90931 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641274579 |
Product | NADP oxidoreductase coenzyme F420-dependent |
Protein accession | YP_001539920 |
Protein GI | 159040668 |
COG category | [R] General function prediction only |
COG ID | [COG2085] Predicted dinucleotide-binding enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.685757 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTGA GGAAAATGAG AATAGGTGTG TTGGGTACTG GTGAGGTTGG TCAAGCTATT GCAACCAAGC TTGTTGAATT AGGTAATGAG GTTCGCATGG GTTCACGTAG TAGGGATAAT GAGGCTGCTA GGAATTGGGC TAGGAGTAAT GGATCATTAG CATCCCATGG AACCTTCAGG GATGCTGCAG AATTCGGCGA GATAATCTTT AATTGTACTA ATGGCCTATA CTCCCTAGAT GCCCTTAAGT CAGCGGGTTA TGAGAATCTT AAGGGGAAGA TAATCATTGA CGTTGCTAAC GCCGTAGACT TCTCCTCAGG TGAACCCACT GTGATTATGC CTGAGGGTAA GTCCCTGGGT GAGAGGATTC AGGAGGCCTT CCCTGAATCC AAGGTTGTTA AGACCCTTAA CTTCGTTAGC TATAGGTTAA TGGTTAATCC TGGGCTACTG GGAGGTGAGA TTGATATGTT CGTGAGCGGG AATAATAAGG ATGCTAAGCA GCTTGTCACC AGCATCTTAA AGGAATGGTT CGGCTGGAGG ACTGTGGTGG ATTTAGGTGA TATAAGGGCT GCTAGGGCTA TGGAACTACT GGTACCGCTA TGGTTTAGGT TATGGGAAAA CACTGGTACT GACTTATTTG GATTTAAGGT AATTATTAAG AAGTGA
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Protein sequence | MSLRKMRIGV LGTGEVGQAI ATKLVELGNE VRMGSRSRDN EAARNWARSN GSLASHGTFR DAAEFGEIIF NCTNGLYSLD ALKSAGYENL KGKIIIDVAN AVDFSSGEPT VIMPEGKSLG ERIQEAFPES KVVKTLNFVS YRLMVNPGLL GGEIDMFVSG NNKDAKQLVT SILKEWFGWR TVVDLGDIRA ARAMELLVPL WFRLWENTGT DLFGFKVIIK K
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