Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0067 |
Symbol | |
ID | 5710205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 81315 |
End bp | 82127 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641274570 |
Product | band 7 protein |
Protein accession | YP_001539911 |
Protein GI | 159040659 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCACAA TTTCCTTAAT TGTGGATATA GTTATTGCAA TAATAGTGCT TATAATAGTC ATCCCTATAT TAGCCTCAGC AATAAGGATT GTTCCAGAGT ATCAAAGACT CGTTAAGCTT AGGTTGGGTA AGTTTAAGGG GGTTTATGGA CCTGGTTTAG TACTGGTTAT ACCCTTCATA GATAGGGTAA TAACCATAGA CTTAAGGACT ATAATGCTTG ATATGCCTTC ACAAAGGGCT TTAACCAGGG ATAATGTTGA AGTCTCAGTG GATGCATCAG TTTACTTAAG GGTTCTTGAC GCTAAGAACG TGGTATTATC AATACAGGAG TATAGGAGCG CAGCGGCAAC AATAGCTGCA GCAACATTAA GGGACGTGGT GGGTATGGTG GATTTAGACA CCCTCCTAAC CCAGAGGGAG GAGGTTGCTA AGAGAATCGC ATCAATTGTC GATGAACATG TGGAGCCCTG GGGGCTTAAA ATATCCAGTG TCGCTATAAA GGACATTAAG CTCCCTGACA CCTTGGTTAG AGCCATGGCT GCCCAAGCAG AGGCTGAGAG GATGAGGAGG GCTAAGGTAA TACTGGCCCA AGCCGACTAC GAGGCTTCTC AAATGTATCT TAAGGCAGCT GAAACATATG TTAAGAACCC AACAGCCTTA ACCCTCAGGC AACTTGATAC TCTCCTTGAG GTTGCTAAGG AACATAACCT AATACTAGTC GTTCCAAGTA ACCTAGAGCC AGTCACAGCC GCAGCCTTAG CATTGAAGGC TAGGGGAGGA CAGGAGGGGC AGGGTTCATC AAGTGCCAGC TGA
|
Protein sequence | MSTISLIVDI VIAIIVLIIV IPILASAIRI VPEYQRLVKL RLGKFKGVYG PGLVLVIPFI DRVITIDLRT IMLDMPSQRA LTRDNVEVSV DASVYLRVLD AKNVVLSIQE YRSAAATIAA ATLRDVVGMV DLDTLLTQRE EVAKRIASIV DEHVEPWGLK ISSVAIKDIK LPDTLVRAMA AQAEAERMRR AKVILAQADY EASQMYLKAA ETYVKNPTAL TLRQLDTLLE VAKEHNLILV VPSNLEPVTA AALALKARGG QEGQGSSSAS
|
| |