Gene Cmaq_0067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0067 
Symbol 
ID5710205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp81315 
End bp82127 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content45% 
IMG OID641274570 
Productband 7 protein 
Protein accessionYP_001539911 
Protein GI159040659 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAA TTTCCTTAAT TGTGGATATA GTTATTGCAA TAATAGTGCT TATAATAGTC 
ATCCCTATAT TAGCCTCAGC AATAAGGATT GTTCCAGAGT ATCAAAGACT CGTTAAGCTT
AGGTTGGGTA AGTTTAAGGG GGTTTATGGA CCTGGTTTAG TACTGGTTAT ACCCTTCATA
GATAGGGTAA TAACCATAGA CTTAAGGACT ATAATGCTTG ATATGCCTTC ACAAAGGGCT
TTAACCAGGG ATAATGTTGA AGTCTCAGTG GATGCATCAG TTTACTTAAG GGTTCTTGAC
GCTAAGAACG TGGTATTATC AATACAGGAG TATAGGAGCG CAGCGGCAAC AATAGCTGCA
GCAACATTAA GGGACGTGGT GGGTATGGTG GATTTAGACA CCCTCCTAAC CCAGAGGGAG
GAGGTTGCTA AGAGAATCGC ATCAATTGTC GATGAACATG TGGAGCCCTG GGGGCTTAAA
ATATCCAGTG TCGCTATAAA GGACATTAAG CTCCCTGACA CCTTGGTTAG AGCCATGGCT
GCCCAAGCAG AGGCTGAGAG GATGAGGAGG GCTAAGGTAA TACTGGCCCA AGCCGACTAC
GAGGCTTCTC AAATGTATCT TAAGGCAGCT GAAACATATG TTAAGAACCC AACAGCCTTA
ACCCTCAGGC AACTTGATAC TCTCCTTGAG GTTGCTAAGG AACATAACCT AATACTAGTC
GTTCCAAGTA ACCTAGAGCC AGTCACAGCC GCAGCCTTAG CATTGAAGGC TAGGGGAGGA
CAGGAGGGGC AGGGTTCATC AAGTGCCAGC TGA
 
Protein sequence
MSTISLIVDI VIAIIVLIIV IPILASAIRI VPEYQRLVKL RLGKFKGVYG PGLVLVIPFI 
DRVITIDLRT IMLDMPSQRA LTRDNVEVSV DASVYLRVLD AKNVVLSIQE YRSAAATIAA
ATLRDVVGMV DLDTLLTQRE EVAKRIASIV DEHVEPWGLK ISSVAIKDIK LPDTLVRAMA
AQAEAERMRR AKVILAQADY EASQMYLKAA ETYVKNPTAL TLRQLDTLLE VAKEHNLILV
VPSNLEPVTA AALALKARGG QEGQGSSSAS