Gene Cmaq_0063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0063 
Symbol 
ID5710232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp76938 
End bp78329 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content46% 
IMG OID641274566 
Productferredoxin-dependent glutamate synthase 
Protein accessionYP_001539907 
Protein GI159040655 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0069] Glutamate synthase domain 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0906024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAGT GGTTTGCATT AAAGGTTAGT GAACTTGCCC TCAGGGTGAA GGCAAGCCTA 
ATAATGCTTA GAGGTATTAG CGACTTCATT AATGATTACC CACTGGATGA GATACTGCTT
AAGGCAATTA AAGGTAAGGA GGGTGTTTAC CCATTTGGTG AATTAGCATC ATATGGGGCA
GCTCTACTAG GGGCACCTAT TAATCGAAGG TCATACCCAA GGTTCCTAAC AATAGATGAC
TTAATCCTTG TTCCACCAGC CTTCACTCCA AAGAGACTTG AGAAGATGGC TGAGTTACTT
AGGGAACCTG TATTCACTGA TGTTAACCTT GAGACTAACA TAGGTGGCTT AAAGTCATCA
ATGCCCCTTG TAGTGGCGTC AATGGGGTCA ACCGACATAG CCAGCAGGTA CAGTATAGTG
ATAGCTAAGG CTGCGGCAAA GGAGGGTATC CCATATGGTA TAGGGGAGAA TGTACACACT
GTTAGGGGGT ATGATAAGAG GTTGACTCAC GGGCATCCAA GCTTCAAGGA GAGGGTTATG
GCGTACTTAA CTAATATTGA TAAGTACGGT GGCGTCTTCA TTCAGCAGAA CGTTGAGGAT
GCGTATGATG AGCATTGGAA TAAGGTGTAT AGTGATAAGG ACCTTGAACC ATACATTGAT
GAAGGTAGGG TTGCCTTCGA AATTAAGGTT GGTCAAGGCG CTAAGCCAGG TTTAGGTGGG
GTAATAAAAA TGAGGAGGGA GGAGGCTATT AAGGTTAAGG AGAAGTACCA CTTCCTGGAG
GATCCTGAGA AGACGAGTAG GAAGGAGGTT GAGAGGTATT CAGTACCGGG AACATACACC
GCAGACATAT TAAGGGGGAT GATTAGGTTA ATGAAAACGA GTTACCCAAG AGCCAAGGTG
TGGGTTAAGG TTGGCCCCTA TAGGGATGTA CTAGATGTCA TTAAGGTTTC CTACGAGGAG
GGTGCTGATG CCGTGGTGAT TGATGGTAAA GAGGGTGGAA CAGGCATGGC TCCCTCAGTG
GCCATGAAGG AGTTGGGTTA CCCAACCATA GTGGGTTTAA TTAAGATTAG GAAGGCTAGG
TTAATGGGTA TTGATGATAA GGTTAGCCTA CTGCTTGCAG GTAGGTTGTT TAACGGCGCC
CATATAGCTA AGTCAAGGGC ATTAGGGGCA TCAGCGATTT ACGCTGGTAG GCCATTCATA
GTGGCCGCCA TGGCTAAGGG TGAGGTTGGT GTTAGGAATT TTATTGAGGC AACCCGCGTG
GAGACGCAAA TGGTTGTTTC AGCATTAGGC AAGTACGATA TTAAGGACCT GGCCCCGGAG
GACTTGGCTT CACTTAATAA GGACTTAGCC TCAGCCTTAG GTATACCCTA CGTTTACTCA
AGCGAGTACT AG
 
Protein sequence
MFEWFALKVS ELALRVKASL IMLRGISDFI NDYPLDEILL KAIKGKEGVY PFGELASYGA 
ALLGAPINRR SYPRFLTIDD LILVPPAFTP KRLEKMAELL REPVFTDVNL ETNIGGLKSS
MPLVVASMGS TDIASRYSIV IAKAAAKEGI PYGIGENVHT VRGYDKRLTH GHPSFKERVM
AYLTNIDKYG GVFIQQNVED AYDEHWNKVY SDKDLEPYID EGRVAFEIKV GQGAKPGLGG
VIKMRREEAI KVKEKYHFLE DPEKTSRKEV ERYSVPGTYT ADILRGMIRL MKTSYPRAKV
WVKVGPYRDV LDVIKVSYEE GADAVVIDGK EGGTGMAPSV AMKELGYPTI VGLIKIRKAR
LMGIDDKVSL LLAGRLFNGA HIAKSRALGA SAIYAGRPFI VAAMAKGEVG VRNFIEATRV
ETQMVVSALG KYDIKDLAPE DLASLNKDLA SALGIPYVYS SEY