| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0060 |
|---|
| Symbol | |
|---|
| ID | 5710153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 74719 |
|---|
| End bp | 75321 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641274563 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001539904 |
|---|
| Protein GI | 159040652 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0232574 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAGTA GATTAATGAA CCTTATTTCA AAAATATACA CCCCCTCCCA ATACTCATCA
ATCAGGGAGG AGGTTTACAG GCTTATCTCA GAGTATAAGA GGAGTAGGTA TGTTCCAATC
AATGAAAGGG TAACCGTACT CTTCGAGGAT GCGGCAACAG TCTGGTTCCA AATAGAGGAG
ACGGCTTACT TAGAGGGTGT TGATGATATT AACGTTGTTA GGGAGGCTGT TAAGACATAT
GCTCCCATGG TGCCGGGAAG TAATGAATTA ACTATCACGG TTTTCATAAA CATAAATAAT
TACGATGAAT TAAGAAACCT ACTACCGAAG TACAATGGTA TTGAGAAGTC AATTAAACTA
GTAATCAATA ACGTTGAATT AGAGGCGACT CCAATTTATC CTGAGGATTA CGCACCAGGA
TCATTACCAA GGAGTATTCA TTACCTTAAG GTCACTGGTA AAGGACTTGA TGATTTAATT
AAATCAAGCA ATAGTGTTAA ACTTAGGATT ACTCATCCAA TGGTTAATAA GGAGGTTACC
TTAAGTAATG ACTCATTAGA GGCTATTAGG GCGTCATTAA AGGGCATTAA CTGGGTCATT
TAA
|
|---|
| Protein sequence | MQSRLMNLIS KIYTPSQYSS IREEVYRLIS EYKRSRYVPI NERVTVLFED AATVWFQIEE
TAYLEGVDDI NVVREAVKTY APMVPGSNEL TITVFININN YDELRNLLPK YNGIEKSIKL
VINNVELEAT PIYPEDYAPG SLPRSIHYLK VTGKGLDDLI KSSNSVKLRI THPMVNKEVT
LSNDSLEAIR ASLKGINWVI
|
|---|
| |