Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0059 |
Symbol | |
ID | 5710183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 74232 |
End bp | 74702 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641274562 |
Product | rubrerythrin |
Protein accession | YP_001539903 |
Protein GI | 159040651 |
COG category | [C] Energy production and conversion |
COG ID | [COG1592] Rubrerythrin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0465733 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAATA AAATCCCTAA GGGTACGAAA ACGTATGAAA ACCTGAAGGC CGCATTCCAA GGTGAATCAA TGGCAAATAG AAGATACCTA TATTACGCTA GGCTAGCTAG GCAGAAGGGG CTTAATGATA TCGCCGAGGT CTTTGAGAAA ACAGCTAATG CTGAAACCGG GCATGCGTTT GGTCACTTAA TGTACCTAGG TGTGGATCCA GTGGCTGAGA TTGAGATAAA CACCATTGAA GATGCCTTAA AGGCATCAAT ATATGGTGAA ACCTACGAGT GGACTCAAAT GTACCCGGCT TTCGCTAAGG TTGCCAGGGA GGAGGGATTC CTAGAGGTTG CTGAGTGGCT TGAGGCTGTG GCTAAGGTTG AGAGATTCCA CGCAAACAGG TTTAATGAGG CACTTGAGAA GTACTATAAG TCAGCTGGAG TTAAAACTGA GGTAGAGGAC GAAACATTAG GTAGACTGTA A
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Protein sequence | MANKIPKGTK TYENLKAAFQ GESMANRRYL YYARLARQKG LNDIAEVFEK TANAETGHAF GHLMYLGVDP VAEIEINTIE DALKASIYGE TYEWTQMYPA FAKVAREEGF LEVAEWLEAV AKVERFHANR FNEALEKYYK SAGVKTEVED ETLGRL
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