Gene Cmaq_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0056 
Symbol 
ID5710369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp71857 
End bp72648 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content43% 
IMG OID641274559 
Productnucleotidyl transferase 
Protein accessionYP_001539900 
Protein GI159040648 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTG GTGCTGTGGT TACGGCTGCA GGCTTAGGTA CTAGGGATGG ACCTTGGACA 
CTTATCTTCC CAAAGGCCCT GCTCCCCCTT GTCGTTAAGA TAAATGGTAT TACTCATATA
AGACCTATGC TTGACCTAAT AATAACAACA CTAACCAGGG TTGGCTGCAG TAAAATATGC
ATAACCAGGA GGAGCGATGA TGATGCAATA GTCAAATACA CTAAGGCGCT TTGGGGTACG
TTTAACGTAG ATTTCACCAT CCAGGATGAA CCAAGGGGTT TCGGTGACGC CGTATATAGG
GGGTTAGGGT GCCTTAATAA TGTTGATTGG GTTATAGTTC ATTCTGATGA TGGATTCATG
ATTAATGAAA GCTCAATACT AATGAATTCC ATTAAATTCG CCGCCGATAG TAATATTGAT
GGATTAGTAT TCGTTAGGAG GGTTAATGAC CCAAGCAGGT ACGGTGTACT GCAGGGGTTT
GTTGAGGAGG GAACAGGCCT CTACAGGGTT ACTGAGATTG AGGAGAAGCC TAAGGTACCT
AAGTCAAACT TAGCCTTAAC AGCAGTGTAC TTATTCAAGT ACAGCATATT AACTGAGACG
TTAAGGAAGA TTGAGGATGA GGGTAGGCCA ATCATTGAAT TCACCGATGC CATTAAGCAA
ATGGTACAAG GTAAAGCCAA GGTAATGGCT ATGGAAGTGG GGCCGAAGAC CTGGTTCAGT
ATAGGTACAC CAAGCGAGTA CACTGTGGTT CATGAGATTG TGCGCGATAG GGATTTACTG
GAGATTATTT AG
 
Protein sequence
MNIGAVVTAA GLGTRDGPWT LIFPKALLPL VVKINGITHI RPMLDLIITT LTRVGCSKIC 
ITRRSDDDAI VKYTKALWGT FNVDFTIQDE PRGFGDAVYR GLGCLNNVDW VIVHSDDGFM
INESSILMNS IKFAADSNID GLVFVRRVND PSRYGVLQGF VEEGTGLYRV TEIEEKPKVP
KSNLALTAVY LFKYSILTET LRKIEDEGRP IIEFTDAIKQ MVQGKAKVMA MEVGPKTWFS
IGTPSEYTVV HEIVRDRDLL EII