| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0054 |
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| Symbol | |
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| ID | 5708810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 70381 |
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| End bp | 71232 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641274557 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001539898 |
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| Protein GI | 159040646 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.419965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAATG AAACACAATA TAAGGCAGCC TTCCCAGACT TAAAGGGTAA GGTAGTGATT
GTTACCGGAT CCACTAGAGG GATCGGTTAC GAGATAGTTA AGTTGTTTAA GGAAATGGGC
TCTAGAGTGG TGGTTAATGC TAGAAGTGCT GATGAGGTTC AAACCGTGGT GAAGAAGCTT
AATGATTATG TCAGTGACGG TGAGGCAATA GGTGTGGCAG GTGACGTAAG TAAGTATGAG
GATTGCGAGA AAATAGTCAA CGAGACCGTG GATAAGTACG GTAAGATAGA TGTACTTGTT
AATAATGCTG GTATAAACAT GATACGTGAC AGCCTCAACT TAAGTATTGA TGACTGGGAG
AGGACACTTA GAATAGACTT ATTCAGTGCC TTCTACATGT CTCAATTAGT TGCCAGAACC
ATGGTGGCTA AGAAGGTTAA GGGATCAATA GTTAACATAG CTTCCATGGT TGGTCCAATA
GTGGCTTTAC CTAAGCGCGC AGCATACGCA GCGGCTAAGG CTGGCTTAGT TGGATTAACT
AGGGTTCTTG CCGTGGAGTG GGCTCCATTG GGGATTAGGG TTAATGCAAT AGCTCCCGGT
TACATATGGT CCTCAGCCCA GGAGGTTAAT ATAGCTAGGG GTGAGTACAC TAGGCAGGAT
ATCGAGGGTA GGGTACCAAT GGGTAGGTAT GGTGATGCTA GGGAGGTTGC CTATGTAGCA
GTCTTCCTAG CTTCAGAATT AGCCTCATAT GTGACCGGCG CGTTAATAAC TGTTGATGGT
GGCTGGACAA TTTATGGTGG CTGGGAAAGA TTACTGAGAC AGATACAGGA ATCCGCAAGG
CAATTAATCT AA
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| Protein sequence | MGNETQYKAA FPDLKGKVVI VTGSTRGIGY EIVKLFKEMG SRVVVNARSA DEVQTVVKKL
NDYVSDGEAI GVAGDVSKYE DCEKIVNETV DKYGKIDVLV NNAGINMIRD SLNLSIDDWE
RTLRIDLFSA FYMSQLVART MVAKKVKGSI VNIASMVGPI VALPKRAAYA AAKAGLVGLT
RVLAVEWAPL GIRVNAIAPG YIWSSAQEVN IARGEYTRQD IEGRVPMGRY GDAREVAYVA
VFLASELASY VTGALITVDG GWTIYGGWER LLRQIQESAR QLI
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