Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0049 |
Symbol | |
ID | 5709077 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 64773 |
End bp | 66455 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641274552 |
Product | major facilitator transporter |
Protein accession | YP_001539893 |
Protein GI | 159040641 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.384329 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTACA AGTGGGTTGT ATTAACTAAT ACAACTCTAG GAGTCATAAT GTCATCAATA AACATGTACA TAGTCCTCAT CTCCCTACCA ACAATCTTCA GGGGGTTGAA CATTAATCCA TTCCTACCCG GGGAGTTTGA TTATCTGCTT TGGGTGTTAA TGGGGTATAG TATAGTGCTG GCAAGTGTCC TCGTAACCTT TGGAAGAATC TCAGACCTAT ATGGTAGGAC TAGACTTTAC ACGCTTGGGT TCATAATATT CACCATAGCT TCTATTTTAC TCTCAGTGAT ACCGAGTGGT TCAGGTAATT TAGGTGCATT ACTACTTATA GTATTTAGGA TGATTCAGGC AGTGGGTGGT GGCTTCCTAA TGGTTAATAG TACCGCATTA TTAACTGATG CCTTCCCACC AGGTGAGAGG GGTAAGGCAT TAGGGTTGAA TCAAACAGCC TTCATAATAG GGTCGTTCCT AGGTATAATA CTTGGCGGCT TATTATCGAA CTATGACTGG CACCTACTCT TCCTAGTTAA TGTACCATTC GCAGTGGCTG GGGCACTTTG GTCAGTGTTT AAGTTAAGGA GGGTGAGCAG TAGTGGTATT AAAGTGAAGA TTGATTACTG GGGTAACGTA ACCCTAGCAG CGGGCCTTGT GTTAATATCC CTTGGCTTCA CCTATGCATT AATGCCCTAT GGTAATTCTG AAATGGGGTG GCTTAACCCA TACGTAGTAT TATCATTCAT AGTCGGGGTA ATTATGCTGG TTGCCTTCAT ACCAATAGAG CTTAGGCAGG AGGCGCCCCT CTTTAATCTA TCATTATTTA AGGTGAGGCC ATTCACCTAC GGCATAATGG CATTATTCCT CTCATCACTG GCGAGGGGCG CCTTAATGTT CCTATTAACA ATCTGGCTTC AAGGCATATA CCTACCGCTA CATGGTTTCA GTTACGCTGA AACACCATTT TGGGCAGGCA TATACATGCT TTCAATGCTC ATTGGAATGG TAATAATGGC GCCAATAGGA GGTGCCTTAA CTGATAAGTA TGGTGCCAGG ATAGTGGCTA CAGTGGGTAT GATAATAATT GCAGCATCAC TCTACCTACT CACTCTCCTG CCTTATAATT TTAACTTAAC ATCATTTGAA TTAATACTAT TCCTAAATGG CCTCGGTAAT GGTTTATTCA GTTCCCCTAA CACAACATCA ATAATGAATG CACTTCACCC TAAGGATAGG GGTGCTGGTA ATGGTATGAG GCAAACCTTC AGTAACGTAG GCTCCACGAT AAGTATGGCA ATGTTTTTCT CAATAGCAAT GAGCATCTTC TCCCAATACG TACCCGTTAG GATTCATGAA ATGGCGTTAA GCTACGGTTT ACCCGCAGAC ATAGCATCCT CCCTCTCAAA GATACCTGCA TCAAGCCTAC TCTTCGCCGC ATTCCTGGGA ATTGACCCGG CATCAGTATT ACCAAGCACC CTAACGGCTA ACCTGCCGGC AAGCATAATG AAGGTCCTGG ATTCAAGCAC CTTCCTACCG AATGTACTTG GATCACCATT CATGATGGGT TTAAGGATTT CCCTATACAT ATCCATAGTA CTGGTGGTGA TAGGAGCAGT ACTCTCATAC ATGAGGGGAG GCAGGTATGT TTACGAGGAA GCTAAGGGGA AGGAAGAAGC CTATACGGCG TAG
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Protein sequence | MEYKWVVLTN TTLGVIMSSI NMYIVLISLP TIFRGLNINP FLPGEFDYLL WVLMGYSIVL ASVLVTFGRI SDLYGRTRLY TLGFIIFTIA SILLSVIPSG SGNLGALLLI VFRMIQAVGG GFLMVNSTAL LTDAFPPGER GKALGLNQTA FIIGSFLGII LGGLLSNYDW HLLFLVNVPF AVAGALWSVF KLRRVSSSGI KVKIDYWGNV TLAAGLVLIS LGFTYALMPY GNSEMGWLNP YVVLSFIVGV IMLVAFIPIE LRQEAPLFNL SLFKVRPFTY GIMALFLSSL ARGALMFLLT IWLQGIYLPL HGFSYAETPF WAGIYMLSML IGMVIMAPIG GALTDKYGAR IVATVGMIII AASLYLLTLL PYNFNLTSFE LILFLNGLGN GLFSSPNTTS IMNALHPKDR GAGNGMRQTF SNVGSTISMA MFFSIAMSIF SQYVPVRIHE MALSYGLPAD IASSLSKIPA SSLLFAAFLG IDPASVLPST LTANLPASIM KVLDSSTFLP NVLGSPFMMG LRISLYISIV LVVIGAVLSY MRGGRYVYEE AKGKEEAYTA
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