| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0048 |
|---|
| Symbol | |
|---|
| ID | 5709076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 63085 |
|---|
| End bp | 64509 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 641274551 |
|---|
| Product | von Willebrand factor type A |
|---|
| Protein accession | YP_001539892 |
|---|
| Protein GI | 159040640 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1240] Mg-chelatase subunit ChlD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGGGGA ATGATATTGA GAAGTTCATA TCAATGGTAC TGAGTAGGGT TTACCAATAC
CTAGTTAACC ACCGGGACGT TGTAAGCCCA GGTTCAGTGA GGAGTTATGA GTATGCGCTT
AGGGACATTG TGGCTAACAT ACTTATTAGT GGTGGTGGGA ATATTGAAGA GAGGTTAATT
AGAGTTGGTG TTGAGAATCT TTACACATCA GTTAATGTTA ACAATGGTGC GGATAAGCGT
GAAATCCTTG AGGAGGCGTT TAAGTATGCC TTATCTCTCG TTAATGACTT GAATATGCGT
AATGATGATG AAATAAACAC TGATGAAGAG GGATTAGTTA AGGGTAATGT AGGTAAGTCA
CAGTTAAGTC CTAATAATGA TAGTAAGGAT GGTGGAACCG GGCAATTAAT CAACCAGGAA
TTAGGTACAG GTAATGAGTC AAGTGATGAT GTGGCTAACG TCATATATGA TGTTTTCTAC
GGTAGTGTAG GTACCATGAA TTTCATTAAC CTGGCTCAAT TACTTAACAT GTTCGTGAAC
CCAATGGCGC ACATTACTGA GAAGGTTAAG GTGCTTAGGA AGTTGGCGAG ATACTTAGCT
AGTTATGGGT TACTTCCACA TCAGGGTAAG GGTGGTTCAA GGGTCTTTAA GGCTCTTGAT
AATGTGGCCC GTGAACCCAC TATAGGTAAT GCACTTAGGG TCTCCAGGTT CACTGAGCAT
TCTAATTACC CAACCTACAT AACGGGGGTT AGGGAATATA GGATTGGTGA CCCAGCTTAT
AGGATTGACT TGGATAAGAC TTCAATGAAT ATGGTTAGGA AGACATTCCT CAATAAGCCA
ATGAGTACAA GGGATATTGT GGTTAGGGAG TACGCGGATG TTAAGTTAAT GGATATTGTA
CTCTGTCTTG ATACCTCAGG AAGCATGAAG GAGTTCAGTG GGGCTTACAT GAAGATGGAC
ATAGCCAAGG AGGCTATTGT AAAGTACATA AGGTACTTAT CTAGGACTAA TGATAGGTTA
TCAATGGTGT TATTCAATTT TAGGGCCGAC ATACTATGGG GTCCTCATTC AGTTAAGAAG
TACATTAATG AAATGGAGGA GATGAGCAGG TACATTTACC CAGGTGGTGG TACTAACATA
GCTAATGCCC TTGAGAAGGC TAGGATTATT TTAAGTAAGT CTAATTACCC TAATAAACAC
ATAATATGTA TTACTGATGG TAGGACTGTT AACGCAAGTA GTTGCATTAA GGAGGCTGTG
AAGTTGAGAC GCATGGGTGT GACATTATCA ACAGTAGCTG TGGGTGATAA TAGTGACTTT
GACCTACTCA TGAGGTTATC TAAGATTGGT AATGGCTTAT TCATAAAGAT AAACGACATA
TCAAACCTCG ATAAGGCTCT AATAATGGAT AAGTTGGGTC TATAA
|
|---|
| Protein sequence | MEGNDIEKFI SMVLSRVYQY LVNHRDVVSP GSVRSYEYAL RDIVANILIS GGGNIEERLI
RVGVENLYTS VNVNNGADKR EILEEAFKYA LSLVNDLNMR NDDEINTDEE GLVKGNVGKS
QLSPNNDSKD GGTGQLINQE LGTGNESSDD VANVIYDVFY GSVGTMNFIN LAQLLNMFVN
PMAHITEKVK VLRKLARYLA SYGLLPHQGK GGSRVFKALD NVAREPTIGN ALRVSRFTEH
SNYPTYITGV REYRIGDPAY RIDLDKTSMN MVRKTFLNKP MSTRDIVVRE YADVKLMDIV
LCLDTSGSMK EFSGAYMKMD IAKEAIVKYI RYLSRTNDRL SMVLFNFRAD ILWGPHSVKK
YINEMEEMSR YIYPGGGTNI ANALEKARII LSKSNYPNKH IICITDGRTV NASSCIKEAV
KLRRMGVTLS TVAVGDNSDF DLLMRLSKIG NGLFIKINDI SNLDKALIMD KLGL
|
|---|
| |