Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0046 |
Symbol | |
ID | 5710006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 60352 |
End bp | 61539 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641274549 |
Product | hypothetical protein |
Protein accession | YP_001539890 |
Protein GI | 159040638 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTTAATA ATGAAGACCT CACCATAGAC CTCTGGGTTG ATCCACCCCT ACTTAATGCA TTATTTGAGG ACGCTAAGAG TATTGCTAAT AGGCTTAACT TAACCTCAGT TATGAATGAG GTTAATGAAC TTAAGGCCAA GGTCTCAGGT AGAATAGGCC CAATACCCAA TATTAGTGGA AGCAGGTACT TCGCATACGC CGTAGATTCA AGTTTCCCAC CGTCACCACT TGAGTTAGTT GGAGGTGTCT TAACGGTAAT AGCCTATGGT TATGTTGGCC AGGTTGGAGG TAAGTCAGAT AGGTATGTTA CAGGTGACAT ACTTTACGAG GACACTAGTG AAATCAGTAG GTCAATTGAA ATACTGTCAA AGATAAGGGA AAGGGAAATG GTGATTAAAC TACTTAAGGA TAAGATGCAG GGTAGGAAGA ACATAGACTT AGTAATACTT GATGGGGAGA TTTACATTCA CCCATTACCG TATAATCTAC CCGCCTATGA GGGTGTTAGG AGGAGGGTTG AGGATGTATT AGAGAGAATG CTTAACCTTG CTGAAAAAAC CAGAACAACC ATAATTGGTG TCGTTAAGAG GGTTAGATCA AGGTACCTTT CCATTTACAC TGGCCACTGC TTATCAACAA ATGATAAACT CATGGCTAGC CTACTCCTCA ATAAGGGTGA GTACATTAGC CTAGGTAATT ACGGTAATTT ACTGCCGCAG TGGCTTCAAG TTAATTACAT GGATTGCGAG ATTAAGAGGG GTATGAGTAG GGAGGAGGCT GAACGGAGAC TCAGTGAGGG TGTTGAGAAT TTGAAGAGGG TTTTCAGTGG AGATGGGGGA AGGTTAAGTG GAATACCTAA GATAGCGAAC ACGGAACTCA TATTCTACAA GGCCCCAATA ACTGCTGTTG CAACTAAACT AGAGGTACTT GACCTAGGTG GAATAGGTGC ACCTAACATT GTTGGGTACT TATCATCACA GACAACTAAC ACAGGTTACC CGTATTTACT CGATTTAGTG GATACATATG TTAGGGTTGA TTCCCGGTTA CTTGACTATG TTAAATCACT TTTAACTAAG TACGCTGGGT TAAGTACAAG TAATGATAAT GTCAGGGAAT TAATTAATAC GCTTCTTCAA TTAACGAATC CCCAGAAGGC TTACCTTTAT AGGCAGATGG AGGGTTAA
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Protein sequence | MFNNEDLTID LWVDPPLLNA LFEDAKSIAN RLNLTSVMNE VNELKAKVSG RIGPIPNISG SRYFAYAVDS SFPPSPLELV GGVLTVIAYG YVGQVGGKSD RYVTGDILYE DTSEISRSIE ILSKIREREM VIKLLKDKMQ GRKNIDLVIL DGEIYIHPLP YNLPAYEGVR RRVEDVLERM LNLAEKTRTT IIGVVKRVRS RYLSIYTGHC LSTNDKLMAS LLLNKGEYIS LGNYGNLLPQ WLQVNYMDCE IKRGMSREEA ERRLSEGVEN LKRVFSGDGG RLSGIPKIAN TELIFYKAPI TAVATKLEVL DLGGIGAPNI VGYLSSQTTN TGYPYLLDLV DTYVRVDSRL LDYVKSLLTK YAGLSTSNDN VRELINTLLQ LTNPQKAYLY RQMEG
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