Gene Cmaq_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0046 
Symbol 
ID5710006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp60352 
End bp61539 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content41% 
IMG OID641274549 
Producthypothetical protein 
Protein accessionYP_001539890 
Protein GI159040638 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTTAATA ATGAAGACCT CACCATAGAC CTCTGGGTTG ATCCACCCCT ACTTAATGCA 
TTATTTGAGG ACGCTAAGAG TATTGCTAAT AGGCTTAACT TAACCTCAGT TATGAATGAG
GTTAATGAAC TTAAGGCCAA GGTCTCAGGT AGAATAGGCC CAATACCCAA TATTAGTGGA
AGCAGGTACT TCGCATACGC CGTAGATTCA AGTTTCCCAC CGTCACCACT TGAGTTAGTT
GGAGGTGTCT TAACGGTAAT AGCCTATGGT TATGTTGGCC AGGTTGGAGG TAAGTCAGAT
AGGTATGTTA CAGGTGACAT ACTTTACGAG GACACTAGTG AAATCAGTAG GTCAATTGAA
ATACTGTCAA AGATAAGGGA AAGGGAAATG GTGATTAAAC TACTTAAGGA TAAGATGCAG
GGTAGGAAGA ACATAGACTT AGTAATACTT GATGGGGAGA TTTACATTCA CCCATTACCG
TATAATCTAC CCGCCTATGA GGGTGTTAGG AGGAGGGTTG AGGATGTATT AGAGAGAATG
CTTAACCTTG CTGAAAAAAC CAGAACAACC ATAATTGGTG TCGTTAAGAG GGTTAGATCA
AGGTACCTTT CCATTTACAC TGGCCACTGC TTATCAACAA ATGATAAACT CATGGCTAGC
CTACTCCTCA ATAAGGGTGA GTACATTAGC CTAGGTAATT ACGGTAATTT ACTGCCGCAG
TGGCTTCAAG TTAATTACAT GGATTGCGAG ATTAAGAGGG GTATGAGTAG GGAGGAGGCT
GAACGGAGAC TCAGTGAGGG TGTTGAGAAT TTGAAGAGGG TTTTCAGTGG AGATGGGGGA
AGGTTAAGTG GAATACCTAA GATAGCGAAC ACGGAACTCA TATTCTACAA GGCCCCAATA
ACTGCTGTTG CAACTAAACT AGAGGTACTT GACCTAGGTG GAATAGGTGC ACCTAACATT
GTTGGGTACT TATCATCACA GACAACTAAC ACAGGTTACC CGTATTTACT CGATTTAGTG
GATACATATG TTAGGGTTGA TTCCCGGTTA CTTGACTATG TTAAATCACT TTTAACTAAG
TACGCTGGGT TAAGTACAAG TAATGATAAT GTCAGGGAAT TAATTAATAC GCTTCTTCAA
TTAACGAATC CCCAGAAGGC TTACCTTTAT AGGCAGATGG AGGGTTAA
 
Protein sequence
MFNNEDLTID LWVDPPLLNA LFEDAKSIAN RLNLTSVMNE VNELKAKVSG RIGPIPNISG 
SRYFAYAVDS SFPPSPLELV GGVLTVIAYG YVGQVGGKSD RYVTGDILYE DTSEISRSIE
ILSKIREREM VIKLLKDKMQ GRKNIDLVIL DGEIYIHPLP YNLPAYEGVR RRVEDVLERM
LNLAEKTRTT IIGVVKRVRS RYLSIYTGHC LSTNDKLMAS LLLNKGEYIS LGNYGNLLPQ
WLQVNYMDCE IKRGMSREEA ERRLSEGVEN LKRVFSGDGG RLSGIPKIAN TELIFYKAPI
TAVATKLEVL DLGGIGAPNI VGYLSSQTTN TGYPYLLDLV DTYVRVDSRL LDYVKSLLTK
YAGLSTSNDN VRELINTLLQ LTNPQKAYLY RQMEG