| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0040 |
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| Symbol | |
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| ID | 5710318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 54915 |
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| End bp | 55967 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641274543 |
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| Product | flap endonuclease-1 |
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| Protein accession | YP_001539884 |
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| Protein GI | 159040632 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) |
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| TIGRFAM ID | [TIGR03674] flap structure-specific endonuclease |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGTGTTA CTGAGCTTGG TAAGCTTATT CCAGATAACT TGAGGAGGAG GGTGAGTCTT
GAGCAGCTTA ACGGTAAGTT AATAGCGTTA GATGCGTATA ATGCTCTTTA TCAATTCCTA
GCATCAATAA GGCAACCCGA TGGTACACCG CTCATGGATT CCCAAGGCAG GGTCACCAGT
CACTTAAGTG GATTACTCTA CAGGACAATT AACCTGCTTG AGTATGGTAT TAAACCAGTC
TATGTGTTTG ATGGTAAGCC CCCTGAATTG AAGCTTATTG AGATTGAGAA GAGGAGGAGG
GTTAGGGAGA AGGCTGTGGA GGATTGGATT AAGGCTGTTG AGGAGGGTAA GAAGAGTGAG
GCTAGGAAGT ATGCGCAGAG GGCATTATTC ATAACGAGTG ATATGGTTGA TGAGGCTAAA
AGACTCCTAG ACTCCATGGG TGTACCCTGG GTTCAGGCTC CAAGCGAGGG GGAGGCTCAA
GCGGCGTATA TGGCTAGTAA GGGTATCGTG TGGGCTGCCG GCAGCCAGGA TTACGACTCA
TTCTTATTCG GTGCCCCTAG GCTTGTTAGG AACTTAACTA TTTCAGGTAG AAGAAAGTTA
CCGGGTAGGG ATGAGTACGT TGAGGTTACA CCGGAGTTAA TAGAGTTGAA TGATGTTCTT
AAGGCGCTTA GGTTAAGGGA TAGGGGTCAA TTAATAGACT TAGCCATACT ACTGGGTACT
GATTATAATC CTGAAGGAAT ACCTGGTATT GGTCCACAGA GGGCTCTTAG GTTGATTCAG
GAATATGGTA GCCTAGATAA ACTCATGAAT ACCGTGCTTA AGAACGCTCA ATTCCCCGTG
GACCCCTTTA AAATAAGGGA ATTCTTCCTC AACCCACCAG TGACCCAGGA GGTTAATGTT
AAGTTTAAGG AACCTAATGA GGATGAGGTA GTTAGGCTAC TTGTGGAGGA GCATGACTTC
AGCCAAGACA GGGTTAAGAA TGCATTAGAA AGATTAAGAA AAAGCATGGG TAAGGCTAAG
GGATCCACGA CCCTCGACTC ATTCTTCGGT TGA
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| Protein sequence | MGVTELGKLI PDNLRRRVSL EQLNGKLIAL DAYNALYQFL ASIRQPDGTP LMDSQGRVTS
HLSGLLYRTI NLLEYGIKPV YVFDGKPPEL KLIEIEKRRR VREKAVEDWI KAVEEGKKSE
ARKYAQRALF ITSDMVDEAK RLLDSMGVPW VQAPSEGEAQ AAYMASKGIV WAAGSQDYDS
FLFGAPRLVR NLTISGRRKL PGRDEYVEVT PELIELNDVL KALRLRDRGQ LIDLAILLGT
DYNPEGIPGI GPQRALRLIQ EYGSLDKLMN TVLKNAQFPV DPFKIREFFL NPPVTQEVNV
KFKEPNEDEV VRLLVEEHDF SQDRVKNALE RLRKSMGKAK GSTTLDSFFG
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