Gene Cmaq_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0038 
Symbol 
ID5709516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp53135 
End bp54499 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content39% 
IMG OID641274541 
Producthypothetical protein 
Protein accessionYP_001539882 
Protein GI159040630 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTTCG CAGTGGCTAA CGCAGTGAAG CCTAACTTAC TGGACATGTG CAGGGGGATT 
CAGAGTAAAG CGGATTTAAC ACCCATTATT GAGCAGTTTA TTGAATCATT ACTAGCCACT
ATAGATAATC CTCAATTATC ATACTTAATA ACACCCCACT GGGGGGCTAG GGCTTTAAGT
AAGGTCATTA TTAATGATAA GGAGAACATT GATGCGAGGT CACTATCACC ATTATTTGCT
GGAAGCGGTG AAGTTTCAAA CCCACTTATC CTTAACCTAA ATGAGTCGGT CATTAGTAGA
AGAATGGATT ATAGGAGGGC TTTACGTGAA GGATACGATT CAATAATCTA CACCGGCGGC
GGTAATAATG TTAATGCACC ATTACTACTG GGGGATTTAA CAATTAAAAG TAGGGGTGAA
CCCACTGAAA TACCTGTAAT ACATGTACCG AAGGCCACTG AGGGCATTAA GGTTAAGTAC
AGTATTGAGT CATCCATAAG AAGTGAACTT TACTATGACT TAGTAATAAT GAGGGAGGGG
GATTCACGAC ACGTGGTAAT CTTTGGTGTT AACGTTAGCC CCATCTTCAT TGGTGTTGAG
TCATGTAAAG TACTAGATGC CTTAATCAAC CTAGTGAACA TGATAACGTC CTTAAGTTTT
AAACTTAACT ATGTTATCCA TATTGCGATT AATGATGAGT GGGGTAACCC AAGGTTCTCA
CCACTCTACT GGGGCTTCAG TACCGTATCC TTCATGGAAG GTATCCTGCG AAGTATAATT
AGTGACTTGG TTCCATTAAC CTACGTCTAC CTGGATTCAT TAGGTGATAG AAATATTGTT
AAGGCTCCTG TGGAGGTTAA GGAGGCATTA GGCATTAATG ATGTGGGTGA ATTAGGATTC
ATGGAGTCCC CAGGCATATT AACGGAGAAT TACGGTTACT GGCCAATTGT GATTAAGAAT
AATGATTCAG GCAGTGAGTT AACTGGCTTT AATGTGAATG ATGTATTAAG GTTAATATTA
AGTAAACTGG AGGCAGACTC ATCAAGCATC ATGAGTAAGG TTACTAAGGC ATTCATTAAT
GAGGTGAGGG GGGTAATGAG CCTTAATGGT GTTGATGATT TAATTGAAAG GATTAATGAA
GATAATGTGA CTAATGTGAA AAGGATCATG ATTAAATTCG TGTATGATAA AGTGAGGGAG
AGGATAAGTA GGGTTAATTT ACTTAACCCC ACGGGTTTTG AATCAATGCT TGATGTAGCG
ACTGGGGAAG CCTACATTAA CACTAGTGAG AATGCCCTTG AGGCTGAGTT GAGGAATCTC
AAGATGAGTA CATTAATTAG ATTAAAGGAA GTATTAATTA AGTGA
 
Protein sequence
MFFAVANAVK PNLLDMCRGI QSKADLTPII EQFIESLLAT IDNPQLSYLI TPHWGARALS 
KVIINDKENI DARSLSPLFA GSGEVSNPLI LNLNESVISR RMDYRRALRE GYDSIIYTGG
GNNVNAPLLL GDLTIKSRGE PTEIPVIHVP KATEGIKVKY SIESSIRSEL YYDLVIMREG
DSRHVVIFGV NVSPIFIGVE SCKVLDALIN LVNMITSLSF KLNYVIHIAI NDEWGNPRFS
PLYWGFSTVS FMEGILRSII SDLVPLTYVY LDSLGDRNIV KAPVEVKEAL GINDVGELGF
MESPGILTEN YGYWPIVIKN NDSGSELTGF NVNDVLRLIL SKLEADSSSI MSKVTKAFIN
EVRGVMSLNG VDDLIERINE DNVTNVKRIM IKFVYDKVRE RISRVNLLNP TGFESMLDVA
TGEAYINTSE NALEAELRNL KMSTLIRLKE VLIK