| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_0031 |
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| Symbol | |
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| ID | 5710121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 46552 |
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| End bp | 46959 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641274534 |
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| Product | endoribonuclease L-PSP |
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| Protein accession | YP_001539875 |
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| Protein GI | 159040623 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
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| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGTGATA CGCTTAAAAA CAAGTATTAC CCAGTGCCCT TGATGATTAG GAATATTGAT
GTAGAGGGAT TACCTAAGGC TGGTCCATAC TCCCATGCAG TGATTGCCAA TGGGTTAGTC
TTCGTATCAG GGCAGTTGGG TACTATTCCA GGTAAGGATT TGCCCTTTGA GGAGCAGTTT
AGGAATGCTG TTAATAAAAT TAGCAAAATA CTGGCTGAGG CTGGTTCATC ATTAGATAAT
GTTGTTAAGG TCACTGTTTA CTTAGCTGAT GCCAAGTACT TTGATGCAAT GAATAAGTTA
TTCAGCGAGT ACTTTAGGGG TAGGCCTGCT AGAACCACTG TTGTTACCGG TATGATTGAT
TCAAGGGCAT TGGTTGAAGT TGATGTAATC GCTGTTGTTA AGGGTTAG
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| Protein sequence | MCDTLKNKYY PVPLMIRNID VEGLPKAGPY SHAVIANGLV FVSGQLGTIP GKDLPFEEQF
RNAVNKISKI LAEAGSSLDN VVKVTVYLAD AKYFDAMNKL FSEYFRGRPA RTTVVTGMID
SRALVEVDVI AVVKG
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