Gene Cmaq_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0028 
Symbol 
ID5709667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp41674 
End bp42141 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content41% 
IMG OID641274531 
ProductNUDIX hydrolase 
Protein accessionYP_001539872 
Protein GI159040620 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACTCC TTGAAACGTT ACTATACATA ATTAAGAACG GTAAAGTACT GCTAATAAGG 
AAGAAGAGGG GATTAGGTGC CGGTTACTTC AATGGTGTTG GCGGTAAGGT TGAGGATAAT
GAGGATGTTA ACAATGCGGC AATCAGGGAA TGCATAGAGG AGATCGGCGT TAAACCAAGG
GGATTAAAAT GGATGGGGCT CCTGGAGTTC TGGAACTACG ATAATAATGC GATTGAATCC
ATTCACTTCG TTCACGTATT CACAGCCAGT GATTACAATG GTGAACCCAG GGAGAGTGAT
GAAGCTGAGC CACTTTGGTT TAACATTAAT GAAATACCCT TCAACTCAAT GTGGGAGGAT
GACTCACTCT GGCTACCCTT AATTTTAAGT GGACGAAGAA TATACGGTAG ATTCATTTTT
AATAAATGGA GGATGATAAG TCATGAAGTT CACTCAATCT GCACTTAA
 
Protein sequence
MILLETLLYI IKNGKVLLIR KKRGLGAGYF NGVGGKVEDN EDVNNAAIRE CIEEIGVKPR 
GLKWMGLLEF WNYDNNAIES IHFVHVFTAS DYNGEPRESD EAEPLWFNIN EIPFNSMWED
DSLWLPLILS GRRIYGRFIF NKWRMISHEV HSICT