Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0027 |
Symbol | |
ID | 5710044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 39876 |
End bp | 41549 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641274530 |
Product | thermosome |
Protein accession | YP_001539871 |
Protein GI | 159040619 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02339] thermosome, various subunits, archaeal |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.196401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGC AGGCCTACAT TGCTCAGATA GGTGGAGTCC CTGTACTAGT ACTTAAGGAG GGGACGCAGA GGGCCTTTGG TAAGGAGGCG CTTAGGATAA ACATAATGGT TGCTAAGGCG GTATCAGAGG TAATGAGGAC TACACTGGGG CCTAAGGGCA TGGATAAGAT GCTTATTGAT AGCCTCGGTG ACATAACTAT AACCAATGAT GGCGCAACAA TACTTAATGA AATGGATGTA CAGCACCCAA TAGGTAAGCT GCTTGTTGAG ATAGCTAAGA CGCAGGATGA TGAGGTTGGT GACGGTACAA CCACAGCAGT AGTATTAGCT GGGGCGCTGC TTGATGAGGC TGAGAAGTTG ATTGAGAAGA ACATTCACCC AACCGTAATA ATATCAGGCT TTAAGAAGGG TCTTGACGCC GCAATCCAGT ACTTAACCAA GATAGCTACC CCAGTGGATA GGGATAATAT TGATGTTCTT AAGAAGGTTG CTGCAACCTC AATGCATGGT AAGATTAGTG AAACCGTTAA GGATCAATTC GCTGAATTAG CGGCCAGGGC AGTATCAATG ATTAAGGAGC AGAGGGGTGA TAAGTGGATT GCGGACTTGG ATAATGTTCA ATTAGTTAAG AAGCACGGCG GCAGTCTACT TGATACTCAA CTCATTCAGG GTGTGGTTGT TGATAAGGAG GTTGTTCATG CCGCAATGCC TAAGAAGATC ACTAACGCTA AGATAGCTCT ACTTGATGCG CCACTTGAGG TTGAGAAGCC TGAGATTGAT GCAGAGATTA GGATCCAGGA CCCAACCCAA ATTAAGGCGT TCCTAGATGA GGAGGAGAAT ATACTGAGGG GTTACGTTGA TAAGCTTAAG TCAATAGGCG CCAATGTAGT CTTCACAACC AAGGGTATTG ATGACATAGC CCAATACTAC CTGGCTAAGG CCGGTATTAT GGCTGTTAGG AGGGTTAAGA GGAGTGACAT TGAGAAGCTT GTTAGGGCAA CTGGAGGGAG ACTGGTAACT AATATAGATG ATTTAACTGA GAATGACCTA GGCTTCGCTG GTCTTGTTGA GGAGAGGAGG GTTGGGGATG AGAAGATGGT GTTCGTTGAA CAGTGCAGGA ACCCGAAGGC AGTGAGCATC CTCATTAGGG GTGGGTTTGA GAGACTGGTT GATGAAGCTG AGAGGAATCT AACAGATGCC TTAAGTGTAG TATCAGATGT AATAGAGAAC CCATTCATAG TACCAGGCGG TGGTGCACCT GAGATTGAGG CAGCAAAGGC AGTTAGGCAG TTGGCGGCTA AGGTTAGTGG TAGGGAGCAG TACGCAATTG AGGCCTTCGC TAACGCATTA GAGGCAGTGC CTAAGACACT TGCGGAGAAC GCCGGCCTTG ATGCAGTAGA TATACTCACT GAGCTTAGGC ACATGCATGA GAGCAGGGAG GATGGGTGGA AGTACGGTAT TGACGCCTTC AGCGGTAAGG TGGCTGACAT GGTTGCAATG AACATTATTG AACCACTGGT TGTTAAGACC CAGGCCTATA AGGCTGCTGT GGAGGCTACA TCAATGATCC TTAGGATTGA TGAGATAATT GCCGCAAGTA AGATTGAAAG CGGCGGTGAG AAGGGTAAGA AGGAGGGGGA GGAGGGGGCT GGTTCATCAG GAAGCTTTGA GTAA
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Protein sequence | MSQQAYIAQI GGVPVLVLKE GTQRAFGKEA LRINIMVAKA VSEVMRTTLG PKGMDKMLID SLGDITITND GATILNEMDV QHPIGKLLVE IAKTQDDEVG DGTTTAVVLA GALLDEAEKL IEKNIHPTVI ISGFKKGLDA AIQYLTKIAT PVDRDNIDVL KKVAATSMHG KISETVKDQF AELAARAVSM IKEQRGDKWI ADLDNVQLVK KHGGSLLDTQ LIQGVVVDKE VVHAAMPKKI TNAKIALLDA PLEVEKPEID AEIRIQDPTQ IKAFLDEEEN ILRGYVDKLK SIGANVVFTT KGIDDIAQYY LAKAGIMAVR RVKRSDIEKL VRATGGRLVT NIDDLTENDL GFAGLVEERR VGDEKMVFVE QCRNPKAVSI LIRGGFERLV DEAERNLTDA LSVVSDVIEN PFIVPGGGAP EIEAAKAVRQ LAAKVSGREQ YAIEAFANAL EAVPKTLAEN AGLDAVDILT ELRHMHESRE DGWKYGIDAF SGKVADMVAM NIIEPLVVKT QAYKAAVEAT SMILRIDEII AASKIESGGE KGKKEGEEGA GSSGSFE
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