Gene Cmaq_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0025 
Symbol 
ID5710042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp39036 
End bp39458 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content43% 
IMG OID641274528 
Productlike-Sm ribonucleoprotein core 
Protein accessionYP_001539869 
Protein GI159040617 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.833597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTTG GTGAAGGAGC AAGGCGATTC AACGCGGAGG TAATGGGTAT GTTAGGTAGG 
AAGGTTCTAG TTAACCTCAT AGGTGGCTCA TTCTACAGGG GGCAATTAGT CGGTATAGAT
CAGGGATTAA ATATTGTCCT AGTTGACGTT ACCAATGATA GGAATGAAAG GTTCCCTAAG
GTTTTAATTA AATCAGAGGC AATTAGGGAT ATTGCCCTAG TGGAGGAGTA CATTGACTTA
AGGGAGTTGG CGAAAATACT TGAGAAGTAC TTCCCAGGAA TGGTGAAGTA CATTGAGGAA
ACCAATACCA TAATAGTGAG CGAGAACGTT ACTGTTACCG AGGAGGGTGT TAAGGGAACT
GGATTAGTGG CTAGGAGGGT TAAGGAGATT TACGATGAAT ACGTCCAATC GAGGAAGAGG
TAA
 
Protein sequence
MAFGEGARRF NAEVMGMLGR KVLVNLIGGS FYRGQLVGID QGLNIVLVDV TNDRNERFPK 
VLIKSEAIRD IALVEEYIDL RELAKILEKY FPGMVKYIEE TNTIIVSENV TVTEEGVKGT
GLVARRVKEI YDEYVQSRKR