Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0025 |
Symbol | |
ID | 5710042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 39036 |
End bp | 39458 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641274528 |
Product | like-Sm ribonucleoprotein core |
Protein accession | YP_001539869 |
Protein GI | 159040617 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.833597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTTTTG GTGAAGGAGC AAGGCGATTC AACGCGGAGG TAATGGGTAT GTTAGGTAGG AAGGTTCTAG TTAACCTCAT AGGTGGCTCA TTCTACAGGG GGCAATTAGT CGGTATAGAT CAGGGATTAA ATATTGTCCT AGTTGACGTT ACCAATGATA GGAATGAAAG GTTCCCTAAG GTTTTAATTA AATCAGAGGC AATTAGGGAT ATTGCCCTAG TGGAGGAGTA CATTGACTTA AGGGAGTTGG CGAAAATACT TGAGAAGTAC TTCCCAGGAA TGGTGAAGTA CATTGAGGAA ACCAATACCA TAATAGTGAG CGAGAACGTT ACTGTTACCG AGGAGGGTGT TAAGGGAACT GGATTAGTGG CTAGGAGGGT TAAGGAGATT TACGATGAAT ACGTCCAATC GAGGAAGAGG TAA
|
Protein sequence | MAFGEGARRF NAEVMGMLGR KVLVNLIGGS FYRGQLVGID QGLNIVLVDV TNDRNERFPK VLIKSEAIRD IALVEEYIDL RELAKILEKY FPGMVKYIEE TNTIIVSENV TVTEEGVKGT GLVARRVKEI YDEYVQSRKR
|
| |