Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0013 |
Symbol | |
ID | 5710167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 25529 |
End bp | 26380 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641274516 |
Product | hypothetical protein |
Protein accession | YP_001539857 |
Protein GI | 159040605 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.421224 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACACGC TGATAACTTA CCTACCATTC TACAGGATAC ATGAGGTCAT TGATTACTTC ATGGTTAACG CTAAGCTACT TAATGTTAAA CACCGCATAG TCTACGTTGA TAATGTGTTT AAGGATAGGC AGGTGGAGTT ACTTAGAAGG ATTCTCCCCG AGGATGTTGA AGTCAGGTAC GGTAATTGGC GTGACAGGAA CTTAACGTTC ATGAGGATTA TAAGGGATGC TAAGGAGGAG GGGTTAGACG CCCTGGTTGT TGATAGTGAT AACCTGCTTG AGGATGAATT AGCTGAGGCT GATCATGAAT TAATCAGCAA ATTCAACTAC TACACTGTGC TTGACCATGA GACCAAGGGT AGGGCAATAT TCCTAAGTAG GAGTATTAAA CTGGGTGACA TTAACGTTAA TGGGAGGAGC ATTGAGGTTT ACGGCTACAG GATCCCAGGC TTCTGGAAGG CGATCTTCTT CATTGGCCCT AAGCAGGCGG TTAGGTTAAG TAAACCACTC CTTGATTCAG TAAACTTAAG CACCCTGGGT AAGATCGAGG AGTCGCTTAG GGATATGGAG CCAGGAATTA GGCTTTACGT CAGTGATGAA ACAACCCTAG GCCTACTACT ATACTATAGT GGTGTAAGGG TGATGCCGTG GGTAACAATG AGCCACCACA TGCATCACGG ATCCACCACC GTTAATGATA TGAGGACCCT TAAGTTACTT GTAGCCACCG CCCATGCCCA GTTGGGTAGG GGGCTTGTGG CAAGGGGTAT GGGTGGTAGG GTTCTCTGGT ATCTTAGTAG ATATAAGATA TCACAGTTAC TCAACTTCAT TGTAAGCTAC GTAGTTAATT AA
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Protein sequence | MDTLITYLPF YRIHEVIDYF MVNAKLLNVK HRIVYVDNVF KDRQVELLRR ILPEDVEVRY GNWRDRNLTF MRIIRDAKEE GLDALVVDSD NLLEDELAEA DHELISKFNY YTVLDHETKG RAIFLSRSIK LGDINVNGRS IEVYGYRIPG FWKAIFFIGP KQAVRLSKPL LDSVNLSTLG KIEESLRDME PGIRLYVSDE TTLGLLLYYS GVRVMPWVTM SHHMHHGSTT VNDMRTLKLL VATAHAQLGR GLVARGMGGR VLWYLSRYKI SQLLNFIVSY VVN
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