Gene Cmaq_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0013 
Symbol 
ID5710167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp25529 
End bp26380 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content45% 
IMG OID641274516 
Producthypothetical protein 
Protein accessionYP_001539857 
Protein GI159040605 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.421224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACACGC TGATAACTTA CCTACCATTC TACAGGATAC ATGAGGTCAT TGATTACTTC 
ATGGTTAACG CTAAGCTACT TAATGTTAAA CACCGCATAG TCTACGTTGA TAATGTGTTT
AAGGATAGGC AGGTGGAGTT ACTTAGAAGG ATTCTCCCCG AGGATGTTGA AGTCAGGTAC
GGTAATTGGC GTGACAGGAA CTTAACGTTC ATGAGGATTA TAAGGGATGC TAAGGAGGAG
GGGTTAGACG CCCTGGTTGT TGATAGTGAT AACCTGCTTG AGGATGAATT AGCTGAGGCT
GATCATGAAT TAATCAGCAA ATTCAACTAC TACACTGTGC TTGACCATGA GACCAAGGGT
AGGGCAATAT TCCTAAGTAG GAGTATTAAA CTGGGTGACA TTAACGTTAA TGGGAGGAGC
ATTGAGGTTT ACGGCTACAG GATCCCAGGC TTCTGGAAGG CGATCTTCTT CATTGGCCCT
AAGCAGGCGG TTAGGTTAAG TAAACCACTC CTTGATTCAG TAAACTTAAG CACCCTGGGT
AAGATCGAGG AGTCGCTTAG GGATATGGAG CCAGGAATTA GGCTTTACGT CAGTGATGAA
ACAACCCTAG GCCTACTACT ATACTATAGT GGTGTAAGGG TGATGCCGTG GGTAACAATG
AGCCACCACA TGCATCACGG ATCCACCACC GTTAATGATA TGAGGACCCT TAAGTTACTT
GTAGCCACCG CCCATGCCCA GTTGGGTAGG GGGCTTGTGG CAAGGGGTAT GGGTGGTAGG
GTTCTCTGGT ATCTTAGTAG ATATAAGATA TCACAGTTAC TCAACTTCAT TGTAAGCTAC
GTAGTTAATT AA
 
Protein sequence
MDTLITYLPF YRIHEVIDYF MVNAKLLNVK HRIVYVDNVF KDRQVELLRR ILPEDVEVRY 
GNWRDRNLTF MRIIRDAKEE GLDALVVDSD NLLEDELAEA DHELISKFNY YTVLDHETKG
RAIFLSRSIK LGDINVNGRS IEVYGYRIPG FWKAIFFIGP KQAVRLSKPL LDSVNLSTLG
KIEESLRDME PGIRLYVSDE TTLGLLLYYS GVRVMPWVTM SHHMHHGSTT VNDMRTLKLL
VATAHAQLGR GLVARGMGGR VLWYLSRYKI SQLLNFIVSY VVN