Gene Cmaq_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_0004 
Symbol 
ID5710203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp14977 
End bp15444 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content48% 
IMG OID641274507 
Productribosomal protein S24E-like protein 
Protein accessionYP_001539848 
Protein GI159040596 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2004] Ribosomal protein S24E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCTAA ATTACTGGTG TTTAATGAGT AGTGGTGAAG AGCAGGGTAG GGAGCAGGCT 
GGGGGTGGTT TAGTAATCTC ACCCCTACCT GAGGGTGTGG AGCCTGGTAA GGTTCAGGTT
AAGGTTATTG AGCAGTTTAA TAACCCACTG CTGCAGCGTA AGGAGGTTAA GGCCATAGTC
TATCACGTTG GTTTACCAAC ACCCCAGAGG CTTCAGTTAA GGGAGGAGTT AGCTAAGGCA
CTTGGCTCAA ACCCGGAACT CACCTATGTG ACGCACGTGT ATACGCAGTA TGGTGTCGGG
GTCTCTAGGA TTGAGGTCCA CGTGTACTTT GATAAGAATA CAGCTGAATT AGTTGAGCCA
CTCTATGTTA GGCTTAGGAA TATGCCTAAG GATCAGGCTA AGAAGATTAG GGATGAGTTG
AAGAGTAGGA GGAAGTCTGA GAAGAAGCCT GCAGCCAAGG GTAAGTGA
 
Protein sequence
MHLNYWCLMS SGEEQGREQA GGGLVISPLP EGVEPGKVQV KVIEQFNNPL LQRKEVKAIV 
YHVGLPTPQR LQLREELAKA LGSNPELTYV THVYTQYGVG VSRIEVHVYF DKNTAELVEP
LYVRLRNMPK DQAKKIRDEL KSRRKSEKKP AAKGK