Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_0004 |
Symbol | |
ID | 5710203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 14977 |
End bp | 15444 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641274507 |
Product | ribosomal protein S24E-like protein |
Protein accession | YP_001539848 |
Protein GI | 159040596 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2004] Ribosomal protein S24E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCTAA ATTACTGGTG TTTAATGAGT AGTGGTGAAG AGCAGGGTAG GGAGCAGGCT GGGGGTGGTT TAGTAATCTC ACCCCTACCT GAGGGTGTGG AGCCTGGTAA GGTTCAGGTT AAGGTTATTG AGCAGTTTAA TAACCCACTG CTGCAGCGTA AGGAGGTTAA GGCCATAGTC TATCACGTTG GTTTACCAAC ACCCCAGAGG CTTCAGTTAA GGGAGGAGTT AGCTAAGGCA CTTGGCTCAA ACCCGGAACT CACCTATGTG ACGCACGTGT ATACGCAGTA TGGTGTCGGG GTCTCTAGGA TTGAGGTCCA CGTGTACTTT GATAAGAATA CAGCTGAATT AGTTGAGCCA CTCTATGTTA GGCTTAGGAA TATGCCTAAG GATCAGGCTA AGAAGATTAG GGATGAGTTG AAGAGTAGGA GGAAGTCTGA GAAGAAGCCT GCAGCCAAGG GTAAGTGA
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Protein sequence | MHLNYWCLMS SGEEQGREQA GGGLVISPLP EGVEPGKVQV KVIEQFNNPL LQRKEVKAIV YHVGLPTPQR LQLREELAKA LGSNPELTYV THVYTQYGVG VSRIEVHVYF DKNTAELVEP LYVRLRNMPK DQAKKIRDEL KSRRKSEKKP AAKGK
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