Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_5107 |
Symbol | |
ID | 5708081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5783115 |
End bp | 5783702 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641274499 |
Product | single-stranded nucleic acid binding R3H domain-containing protein |
Protein accession | YP_001539840 |
Protein GI | 159040587 |
COG category | [R] General function prediction only |
COG ID | [COG1847] Predicted RNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000018818 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | GTGACCGAGA CCAGCATCCC CCGCGCCGAC GAATCCCAGG ACGCCGAGGG GACGGAGGCG ACCGCGAAGG GCCACATCGA GTCGACCGAG CAAGAGCCCG GCGGTACGGA GCAGCGAGCC AGCACCGAGG GCGATCTGTT CCGGCAGAGC GAGATCGCCG CCGACTACGT GGAGGGCCTC CTCGACGTCC TCGACTACGA CGGGGACATC GACGAGTTGG TCTCCGGCGG TCGGCCAGTC GTCGAGGTGG TCGGCGGCCG GCTCGAGAAT CTCGTCGGCC AGCGGGGTGC CACCCTGGAG GCACTCCAGG AGCTCGCCCG ACTCGCTGTC TTCCGGCAGA CCGGTACCCC CAGCCGACTG CTGCTGGACG TGGGCGGCTA CCGGGCTGGC CGCCGTAAGG AACTCGCCGC CGTGGCGAAG AACGCCGTCG AGAAGGTCCG GGAGTACGGC GAGCCGGTGC GGCTGGAACC GATGTCGGCC TTCGAACGCA AGTGTGTTCA TGACGTGGTC AACGCGATCG ATGGTGTGGC GAGCGAGTCC GAGGGCGTCG AGCCGAGCCG GCGCATCATC GTCCGTCCGG TGGACTGA
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Protein sequence | MTETSIPRAD ESQDAEGTEA TAKGHIESTE QEPGGTEQRA STEGDLFRQS EIAADYVEGL LDVLDYDGDI DELVSGGRPV VEVVGGRLEN LVGQRGATLE ALQELARLAV FRQTGTPSRL LLDVGGYRAG RRKELAAVAK NAVEKVREYG EPVRLEPMSA FERKCVHDVV NAIDGVASES EGVEPSRRII VRPVD
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