| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_5102 |
|---|
| Symbol | |
|---|
| ID | 5704070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 5776775 |
|---|
| End bp | 5777758 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641274494 |
|---|
| Product | D-alanine--D-alanine ligase |
|---|
| Protein accession | YP_001539835 |
|---|
| Protein GI | 159040582 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
|---|
| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.842129 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000223224 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGGTACGA CCGCTGCCGA TCCGGCTGTC CTCTTGACCG ACCTGCGCGT GCTGGTACTC
GCCGGCGGCC TTTCCTATGA ACGGGACGTC TCGCTGCGAT CCGGCCGGCG GGTGCTGGAC
GCGCTGCGTG CGGTGGGCGT GGAGGCGGAG CTACGCGACG CGGACGTCGC CCTGCTGCCG
TCACTCGTCG CCGATCCACC GGACGCGGTG GTCATCGCCC TGCACGGTGC CACTGGTGAG
GACGGTTCAC TTCGCGGTGT GCTGGACCTC TGCAACGTCC CGTACGTCGG CTGCGACGCC
CGCTCGTCAC GCCTCGCGTG GGACAAACCC TCGGCCAAGG CCGTGTTGCG GGAAGCGGGC
ATCCCCACCC CGGACTGGGT GGCACTACCT CATGATCGCT TCTCCGAGCT CGGTGCGGTG
GCGGTACTGG ACCGCATCGT CGACCGCTTG GGGCTCCCGC TGATGGTGAA GCCCGCGCAG
GGCGGCTCGG GTCTGGGCGC CGCCGTGGTC CGGGATGGTC CGGCCCTACC GGCCGCGATG
GTCGGTTGTT TCGCCTACGA CTCGACCGCC CTCGTCGAAC GCTACCTGCC CGGAACGGAC
GTGGCGGTAT CCGTGATCGA CCTCGGCGAG GGGCCGCAGG CCCTGCCGGC GGTGGAGATC
GTGCCCCGAA ACGGTGTGTA CGACTACGCC GCCCGGTACA CGGCCGGCCG TACCACCTGG
CACACGCCGG CCCGCCTGGA CACCGAGGTG GCCGAAGCGG TCGCCACGGT CGCCGTCGCC
GCCCACACCG CGCTCGGGTT GCGCGACCTC AGCCGGGTCG ACCTGATCGT GGATGCCGAC
CACCAGCCGC ACGTCCTCGG GGTGAACGTC GCACCCGGCA TGACGGAGAC CTCACTGCTA
CCGCTCGCGG CCCAGGCCGC GAGTCTCGAC TTCGGCCGAA TGATCGGAAC CTTGGTCTCT
CGGGCCGTTG CCCGGGCCAC CTGA
|
|---|
| Protein sequence | MGTTAADPAV LLTDLRVLVL AGGLSYERDV SLRSGRRVLD ALRAVGVEAE LRDADVALLP
SLVADPPDAV VIALHGATGE DGSLRGVLDL CNVPYVGCDA RSSRLAWDKP SAKAVLREAG
IPTPDWVALP HDRFSELGAV AVLDRIVDRL GLPLMVKPAQ GGSGLGAAVV RDGPALPAAM
VGCFAYDSTA LVERYLPGTD VAVSVIDLGE GPQALPAVEI VPRNGVYDYA ARYTAGRTTW
HTPARLDTEV AEAVATVAVA AHTALGLRDL SRVDLIVDAD HQPHVLGVNV APGMTETSLL
PLAAQAASLD FGRMIGTLVS RAVARAT
|
|---|
| |