Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_5095 |
Symbol | |
ID | 5704063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 5769868 |
End bp | 5770608 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641274487 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001539828 |
Protein GI | 159040575 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000320537 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGACGA ACGGGTCGAT CGGGCGGCCG GTGGGCGACA ACAGCCCACC GGCGGCCGAC CCGCCATCCG ACCTCGACCT GCTGCGGGCA CACGTCGCCG GTGACCGGGA CGCCTTCGCC GGGCTGTTCC ACCGGCACCG GGACCGCCTC TGGGCGGTCG CGCTCCGCAC TCTCGGCGAC CGGGAGGAGG CAGCCGACGC GCTGCAGGAC GCGTTGCTTT CCGCCCATCG GGCCGCCGGG CGGTTCCGGG GCGACTCTGC GGTGACCACC TGGCTTCACC GAATCGTGGT CAACGCCTGC CTGGACCGGA TACGACGACG GCAGGCCCAC CCGACGGTGC CGCTGCCCGA CGGCGTCCGC GACCACACGG GAGCGACCGG CGGCACGGAG CCGGCTGCTC CCGTGGCCGA CCATGACACC GCCCTCGTGG TCCGGGAGGC ACTGGCGGCG CTGCCGGTCG AGCAGCGTGC CGCGCTGGTT CTGGTTGACG TGCAGGGCTA CCCGGTAGCC GAGGTGGCCC GCATCCTGGA TGTCGCCGAG GGGACGGTGA AGAGCCGGTG TGCCCGGGGC CGGGCCCGCC TGGCGGCGAC GCTCGGACAT CTCCGAACGG CACCGGAGCA GGAGCAGCCG GCCTCGGGCG GCAGCGTGCC GGCCGTCACC CGACGGAACC GGCAACCGCG TGGCAGCGTC CGATCAGGGT CGGGGCGGCC CCGGCGCGAC GGCAACCAGG AGGACCTGTG A
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Protein sequence | MATNGSIGRP VGDNSPPAAD PPSDLDLLRA HVAGDRDAFA GLFHRHRDRL WAVALRTLGD REEAADALQD ALLSAHRAAG RFRGDSAVTT WLHRIVVNAC LDRIRRRQAH PTVPLPDGVR DHTGATGGTE PAAPVADHDT ALVVREALAA LPVEQRAALV LVDVQGYPVA EVARILDVAE GTVKSRCARG RARLAATLGH LRTAPEQEQP ASGGSVPAVT RRNRQPRGSV RSGSGRPRRD GNQEDL
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